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RAPSearch2: a fast and memory-efficient protein similarity search tool for next-generation sequencing data

Summary: With the wide application of next-generation sequencing (NGS) techniques, fast tools for protein similarity search that scale well to large query datasets and large databases are highly desirable. In a previous work, we developed RAPSearch, an algorithm that achieved a ~20–90-fold speedup r...

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Detalles Bibliográficos
Autores principales: Zhao, Yongan, Tang, Haixu, Ye, Yuzhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3244761/
https://www.ncbi.nlm.nih.gov/pubmed/22039206
http://dx.doi.org/10.1093/bioinformatics/btr595