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Postnatal Growth and DNA Methylation Are Associated With Differential Gene Expression of the TACSTD2 Gene and Childhood Fat Mass
Rapid postnatal growth is associated with increased risk of childhood adiposity. The aim of this study was to establish whether this pathway is mediated by altered DNA methylation and gene expression. Two distinct cohorts, one preterm (n = 121) and one term born (n = 6,990), were studied. Explorator...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Diabetes Association
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3266428/ https://www.ncbi.nlm.nih.gov/pubmed/22190649 http://dx.doi.org/10.2337/db11-1039 |
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author | Groom, Alexandra Potter, Catherine Swan, Daniel C. Fatemifar, Ghazaleh Evans, David M. Ring, Susan M. Turcot, Valerie Pearce, Mark S. Embleton, Nicholas D. Davey Smith, George Mathers, John C. Relton, Caroline L. |
author_facet | Groom, Alexandra Potter, Catherine Swan, Daniel C. Fatemifar, Ghazaleh Evans, David M. Ring, Susan M. Turcot, Valerie Pearce, Mark S. Embleton, Nicholas D. Davey Smith, George Mathers, John C. Relton, Caroline L. |
author_sort | Groom, Alexandra |
collection | PubMed |
description | Rapid postnatal growth is associated with increased risk of childhood adiposity. The aim of this study was to establish whether this pathway is mediated by altered DNA methylation and gene expression. Two distinct cohorts, one preterm (n = 121) and one term born (n = 6,990), were studied. Exploratory analyses were performed using microarrays to identify differentially expressed genes in whole blood from children defined as “slow” (n = 10) compared with “rapid” (n = 10) postnatal (term to 12 weeks corrected age) growers. Methylation within the identified TACSTD2 gene was measured in both cohorts, and rs61779296 genotype was determined by Pyrosequencing or imputation and analyzed in relation to body composition at 9–15 years of age. In cohort 1, TACSTD2 expression was inversely correlated with methylation (P = 0.016), and both measures were associated with fat mass (expression, P = 0.049; methylation, P = 0.037). Although associated with gene expression (cohort 1, P = 0.008) and methylation (cohort 1, P = 2.98 × 10(−11); cohort 2, P = 3.43 × 10(−15)), rs61779296 was not associated with postnatal growth or fat mass in either cohort following multiple regression analysis. Hence, the lack of association between fat mass and a methylation proxy SNP suggests that reverse causation or confounding may explain the initial association between fat mass and gene regulation. Noncausal methylation patterns may still be useful predictors of later adiposity. |
format | Online Article Text |
id | pubmed-3266428 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | American Diabetes Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-32664282013-02-01 Postnatal Growth and DNA Methylation Are Associated With Differential Gene Expression of the TACSTD2 Gene and Childhood Fat Mass Groom, Alexandra Potter, Catherine Swan, Daniel C. Fatemifar, Ghazaleh Evans, David M. Ring, Susan M. Turcot, Valerie Pearce, Mark S. Embleton, Nicholas D. Davey Smith, George Mathers, John C. Relton, Caroline L. Diabetes Obesity Studies Rapid postnatal growth is associated with increased risk of childhood adiposity. The aim of this study was to establish whether this pathway is mediated by altered DNA methylation and gene expression. Two distinct cohorts, one preterm (n = 121) and one term born (n = 6,990), were studied. Exploratory analyses were performed using microarrays to identify differentially expressed genes in whole blood from children defined as “slow” (n = 10) compared with “rapid” (n = 10) postnatal (term to 12 weeks corrected age) growers. Methylation within the identified TACSTD2 gene was measured in both cohorts, and rs61779296 genotype was determined by Pyrosequencing or imputation and analyzed in relation to body composition at 9–15 years of age. In cohort 1, TACSTD2 expression was inversely correlated with methylation (P = 0.016), and both measures were associated with fat mass (expression, P = 0.049; methylation, P = 0.037). Although associated with gene expression (cohort 1, P = 0.008) and methylation (cohort 1, P = 2.98 × 10(−11); cohort 2, P = 3.43 × 10(−15)), rs61779296 was not associated with postnatal growth or fat mass in either cohort following multiple regression analysis. Hence, the lack of association between fat mass and a methylation proxy SNP suggests that reverse causation or confounding may explain the initial association between fat mass and gene regulation. Noncausal methylation patterns may still be useful predictors of later adiposity. American Diabetes Association 2012-02 2012-01-17 /pmc/articles/PMC3266428/ /pubmed/22190649 http://dx.doi.org/10.2337/db11-1039 Text en © 2012 by the American Diabetes Association. Readers may use this article as long as the work is properly cited, the use is educational and not for profit, and the work is not altered. See http://creativecommons.org/licenses/by-nc-nd/3.0/ for details. |
spellingShingle | Obesity Studies Groom, Alexandra Potter, Catherine Swan, Daniel C. Fatemifar, Ghazaleh Evans, David M. Ring, Susan M. Turcot, Valerie Pearce, Mark S. Embleton, Nicholas D. Davey Smith, George Mathers, John C. Relton, Caroline L. Postnatal Growth and DNA Methylation Are Associated With Differential Gene Expression of the TACSTD2 Gene and Childhood Fat Mass |
title | Postnatal Growth and DNA Methylation Are Associated With Differential Gene Expression of the TACSTD2 Gene and Childhood Fat Mass |
title_full | Postnatal Growth and DNA Methylation Are Associated With Differential Gene Expression of the TACSTD2 Gene and Childhood Fat Mass |
title_fullStr | Postnatal Growth and DNA Methylation Are Associated With Differential Gene Expression of the TACSTD2 Gene and Childhood Fat Mass |
title_full_unstemmed | Postnatal Growth and DNA Methylation Are Associated With Differential Gene Expression of the TACSTD2 Gene and Childhood Fat Mass |
title_short | Postnatal Growth and DNA Methylation Are Associated With Differential Gene Expression of the TACSTD2 Gene and Childhood Fat Mass |
title_sort | postnatal growth and dna methylation are associated with differential gene expression of the tacstd2 gene and childhood fat mass |
topic | Obesity Studies |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3266428/ https://www.ncbi.nlm.nih.gov/pubmed/22190649 http://dx.doi.org/10.2337/db11-1039 |
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