Cargando…

Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay

5-Lipoxygenase (5-LO) catalyzes the two initial steps in the biosynthesis of leukotrienes (LT), a group of inflammatory lipid mediators derived from arachidonic acid. Here, we investigated the regulation of 5-LO mRNA expression by alternative splicing and nonsense-mediated mRNA decay (NMD). In the p...

Descripción completa

Detalles Bibliográficos
Autores principales: Ochs, Meike J., Sorg, Bernd L., Pufahl, Laura, Grez, Manuel, Suess, Beatrix, Steinhilber, Dieter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3283622/
https://www.ncbi.nlm.nih.gov/pubmed/22363630
http://dx.doi.org/10.1371/journal.pone.0031363
_version_ 1782224220828205056
author Ochs, Meike J.
Sorg, Bernd L.
Pufahl, Laura
Grez, Manuel
Suess, Beatrix
Steinhilber, Dieter
author_facet Ochs, Meike J.
Sorg, Bernd L.
Pufahl, Laura
Grez, Manuel
Suess, Beatrix
Steinhilber, Dieter
author_sort Ochs, Meike J.
collection PubMed
description 5-Lipoxygenase (5-LO) catalyzes the two initial steps in the biosynthesis of leukotrienes (LT), a group of inflammatory lipid mediators derived from arachidonic acid. Here, we investigated the regulation of 5-LO mRNA expression by alternative splicing and nonsense-mediated mRNA decay (NMD). In the present study, we report the identification of 2 truncated transcripts and 4 novel 5-LO splice variants containing premature termination codons (PTC). The characterization of one of the splice variants, 5-LOΔ3, revealed that it is a target for NMD since knockdown of the NMD factors UPF1, UPF2 and UPF3b in the human monocytic cell line Mono Mac 6 (MM6) altered the expression of 5-LOΔ3 mRNA up to 2-fold in a cell differentiation-dependent manner suggesting that cell differentiation alters the composition or function of the NMD complex. In contrast, the mature 5-LO mRNA transcript was not affected by UPF knockdown. Thus, the data suggest that the coupling of alternative splicing and NMD is involved in the regulation of 5-LO gene expression.
format Online
Article
Text
id pubmed-3283622
institution National Center for Biotechnology Information
language English
publishDate 2012
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-32836222012-02-23 Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay Ochs, Meike J. Sorg, Bernd L. Pufahl, Laura Grez, Manuel Suess, Beatrix Steinhilber, Dieter PLoS One Research Article 5-Lipoxygenase (5-LO) catalyzes the two initial steps in the biosynthesis of leukotrienes (LT), a group of inflammatory lipid mediators derived from arachidonic acid. Here, we investigated the regulation of 5-LO mRNA expression by alternative splicing and nonsense-mediated mRNA decay (NMD). In the present study, we report the identification of 2 truncated transcripts and 4 novel 5-LO splice variants containing premature termination codons (PTC). The characterization of one of the splice variants, 5-LOΔ3, revealed that it is a target for NMD since knockdown of the NMD factors UPF1, UPF2 and UPF3b in the human monocytic cell line Mono Mac 6 (MM6) altered the expression of 5-LOΔ3 mRNA up to 2-fold in a cell differentiation-dependent manner suggesting that cell differentiation alters the composition or function of the NMD complex. In contrast, the mature 5-LO mRNA transcript was not affected by UPF knockdown. Thus, the data suggest that the coupling of alternative splicing and NMD is involved in the regulation of 5-LO gene expression. Public Library of Science 2012-02-21 /pmc/articles/PMC3283622/ /pubmed/22363630 http://dx.doi.org/10.1371/journal.pone.0031363 Text en Ochs et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ochs, Meike J.
Sorg, Bernd L.
Pufahl, Laura
Grez, Manuel
Suess, Beatrix
Steinhilber, Dieter
Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay
title Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay
title_full Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay
title_fullStr Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay
title_full_unstemmed Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay
title_short Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay
title_sort post-transcriptional regulation of 5-lipoxygenase mrna expression via alternative splicing and nonsense-mediated mrna decay
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3283622/
https://www.ncbi.nlm.nih.gov/pubmed/22363630
http://dx.doi.org/10.1371/journal.pone.0031363
work_keys_str_mv AT ochsmeikej posttranscriptionalregulationof5lipoxygenasemrnaexpressionviaalternativesplicingandnonsensemediatedmrnadecay
AT sorgberndl posttranscriptionalregulationof5lipoxygenasemrnaexpressionviaalternativesplicingandnonsensemediatedmrnadecay
AT pufahllaura posttranscriptionalregulationof5lipoxygenasemrnaexpressionviaalternativesplicingandnonsensemediatedmrnadecay
AT grezmanuel posttranscriptionalregulationof5lipoxygenasemrnaexpressionviaalternativesplicingandnonsensemediatedmrnadecay
AT suessbeatrix posttranscriptionalregulationof5lipoxygenasemrnaexpressionviaalternativesplicingandnonsensemediatedmrnadecay
AT steinhilberdieter posttranscriptionalregulationof5lipoxygenasemrnaexpressionviaalternativesplicingandnonsensemediatedmrnadecay