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Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study

BACKGROUND: With the fast advances in nextgen sequencing technology, high-throughput RNA sequencing has emerged as a powerful and cost-effective way for transcriptome study. De novo assembly of transcripts provides an important solution to transcriptome analysis for organisms with no reference genom...

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Detalles Bibliográficos
Autores principales: Zhao, Qiong-Yi, Wang, Yi, Kong, Yi-Meng, Luo, Da, Li, Xuan, Hao, Pei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3287467/
https://www.ncbi.nlm.nih.gov/pubmed/22373417
http://dx.doi.org/10.1186/1471-2105-12-S14-S2