Using the RDP Classifier to Predict Taxonomic Novelty and Reduce the Search Space for Finding Novel Organisms

BACKGROUND: Currently, the naïve Bayesian classifier provided by the Ribosomal Database Project (RDP) is one of the most widely used tools to classify 16S rRNA sequences, mainly collected from environmental samples. We show that RDP has 97+% assignment accuracy and is fast for 250 bp and longer read...

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Detalles Bibliográficos
Autores principales: Lan, Yemin, Wang, Qiong, Cole, James R., Rosen, Gail L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3293824/
https://www.ncbi.nlm.nih.gov/pubmed/22403664
http://dx.doi.org/10.1371/journal.pone.0032491

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3293824/
https://www.ncbi.nlm.nih.gov/pubmed/22403664
http://dx.doi.org/10.1371/journal.pone.0032491

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