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A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding

The mechanism of DNA translocation by papillomavirus E1 and polyomavirus LTag hexameric helicases involves consecutive remodelling of subunit–subunit interactions around the hexameric ring. Our biochemical analysis of E1 helicase demonstrates that a 26-residue C-terminal segment is critical for main...

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Autores principales: Whelan, Fiona, Stead, Jonathan A., Shkumatov, Alexander V., Svergun, Dmitri I., Sanders, Cyril M., Antson, Alfred A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3300016/
https://www.ncbi.nlm.nih.gov/pubmed/22067453
http://dx.doi.org/10.1093/nar/gkr906
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author Whelan, Fiona
Stead, Jonathan A.
Shkumatov, Alexander V.
Svergun, Dmitri I.
Sanders, Cyril M.
Antson, Alfred A.
author_facet Whelan, Fiona
Stead, Jonathan A.
Shkumatov, Alexander V.
Svergun, Dmitri I.
Sanders, Cyril M.
Antson, Alfred A.
author_sort Whelan, Fiona
collection PubMed
description The mechanism of DNA translocation by papillomavirus E1 and polyomavirus LTag hexameric helicases involves consecutive remodelling of subunit–subunit interactions around the hexameric ring. Our biochemical analysis of E1 helicase demonstrates that a 26-residue C-terminal segment is critical for maintaining the hexameric assembly. As this segment was not resolved in previous crystallographic analysis of E1 and LTag hexameric helicases, we determined the solution structure of the intact hexameric E1 helicase by Small Angle X-ray Scattering. We find that the C-terminal segment is flexible and occupies a cleft between adjacent subunits in the ring. Electrostatic potential calculations indicate that the negatively charged C-terminus can bridge the positive electrostatic potentials of adjacent subunits. Our observations support a model in which the C-terminal peptide serves as a flexible ‘brace’ maintaining the oligomeric state during conformational changes associated with ATP hydrolysis. We argue that these interactions impart processivity to DNA unwinding. Sequence and disorder analysis suggest that this mechanism of hexamer stabilization would be conserved among papillomavirus E1 and polyomavirus LTag hexameric helicases.
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spelling pubmed-33000162012-03-13 A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding Whelan, Fiona Stead, Jonathan A. Shkumatov, Alexander V. Svergun, Dmitri I. Sanders, Cyril M. Antson, Alfred A. Nucleic Acids Res Structural Biology The mechanism of DNA translocation by papillomavirus E1 and polyomavirus LTag hexameric helicases involves consecutive remodelling of subunit–subunit interactions around the hexameric ring. Our biochemical analysis of E1 helicase demonstrates that a 26-residue C-terminal segment is critical for maintaining the hexameric assembly. As this segment was not resolved in previous crystallographic analysis of E1 and LTag hexameric helicases, we determined the solution structure of the intact hexameric E1 helicase by Small Angle X-ray Scattering. We find that the C-terminal segment is flexible and occupies a cleft between adjacent subunits in the ring. Electrostatic potential calculations indicate that the negatively charged C-terminus can bridge the positive electrostatic potentials of adjacent subunits. Our observations support a model in which the C-terminal peptide serves as a flexible ‘brace’ maintaining the oligomeric state during conformational changes associated with ATP hydrolysis. We argue that these interactions impart processivity to DNA unwinding. Sequence and disorder analysis suggest that this mechanism of hexamer stabilization would be conserved among papillomavirus E1 and polyomavirus LTag hexameric helicases. Oxford University Press 2012-03 2011-11-08 /pmc/articles/PMC3300016/ /pubmed/22067453 http://dx.doi.org/10.1093/nar/gkr906 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Structural Biology
Whelan, Fiona
Stead, Jonathan A.
Shkumatov, Alexander V.
Svergun, Dmitri I.
Sanders, Cyril M.
Antson, Alfred A.
A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding
title A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding
title_full A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding
title_fullStr A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding
title_full_unstemmed A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding
title_short A flexible brace maintains the assembly of a hexameric replicative helicase during DNA unwinding
title_sort flexible brace maintains the assembly of a hexameric replicative helicase during dna unwinding
topic Structural Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3300016/
https://www.ncbi.nlm.nih.gov/pubmed/22067453
http://dx.doi.org/10.1093/nar/gkr906
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