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A Common SMAD7 Variant Is Associated with Risk of Colorectal Cancer: Evidence from a Case-Control Study and a Meta-Analysis
BACKGROUND: A common genetic variant, rs4939827, located in SMAD7, was identified by two recent genome-wide association (GWA) studies to be strongly associated with the risk of colorectal cancer (CRC). However, the following replication studies yielded conflicting results. METHOD AND FINDINGS: We co...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3310071/ https://www.ncbi.nlm.nih.gov/pubmed/22457752 http://dx.doi.org/10.1371/journal.pone.0033318 |
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author | Song, Qibin Zhu, Beibei Hu, Weiguo Cheng, Liming Gong, Hongyun Xu, Bin Zheng, Xiawen Zou, Li Zhong, Rong Duan, Shengyu Chen, Wei Rui, Rui Wu, Jing Miao, Xiaoping |
author_facet | Song, Qibin Zhu, Beibei Hu, Weiguo Cheng, Liming Gong, Hongyun Xu, Bin Zheng, Xiawen Zou, Li Zhong, Rong Duan, Shengyu Chen, Wei Rui, Rui Wu, Jing Miao, Xiaoping |
author_sort | Song, Qibin |
collection | PubMed |
description | BACKGROUND: A common genetic variant, rs4939827, located in SMAD7, was identified by two recent genome-wide association (GWA) studies to be strongly associated with the risk of colorectal cancer (CRC). However, the following replication studies yielded conflicting results. METHOD AND FINDINGS: We conducted a case-control study of 641 cases and 1037 controls in a Chinese population and then performed a meta-analysis, integrating our and published data of 34313 cases and 33251 controls, to clarify the relationship between rs4939827 and CRC risk. In our case-control study, the dominant model was significant associated with increased CRC risk [Odds Ratio (OR) = 1.46; 95% confidence interval (95% CI), 1.19–1.80]. The following meta-analysis further confirmed this significant association for all genetic models but with significant between-study heterogeneity (all P for heterogeneity <0.1). By stratified analysis, we revealed that ethnicity, sample size, and tumor sites might constitute the source of heterogeneity. The cumulative analysis suggested that evident tendency to significant association was seen with adding study samples over time; whilst, sensitive analysis showed results before and after removal of each study were similar, indicating the highly stability of the current results. CONCLUSION: Results from our case-control study and the meta-analysis collectively confirmed the significant association of the variant rs4939827 with increased risk of colorectal cancer. Nevertheless, fine-mapping of the susceptibility loci defined by rs4939287 should be imposed to reveal causal variant. |
format | Online Article Text |
id | pubmed-3310071 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-33100712012-03-28 A Common SMAD7 Variant Is Associated with Risk of Colorectal Cancer: Evidence from a Case-Control Study and a Meta-Analysis Song, Qibin Zhu, Beibei Hu, Weiguo Cheng, Liming Gong, Hongyun Xu, Bin Zheng, Xiawen Zou, Li Zhong, Rong Duan, Shengyu Chen, Wei Rui, Rui Wu, Jing Miao, Xiaoping PLoS One Research Article BACKGROUND: A common genetic variant, rs4939827, located in SMAD7, was identified by two recent genome-wide association (GWA) studies to be strongly associated with the risk of colorectal cancer (CRC). However, the following replication studies yielded conflicting results. METHOD AND FINDINGS: We conducted a case-control study of 641 cases and 1037 controls in a Chinese population and then performed a meta-analysis, integrating our and published data of 34313 cases and 33251 controls, to clarify the relationship between rs4939827 and CRC risk. In our case-control study, the dominant model was significant associated with increased CRC risk [Odds Ratio (OR) = 1.46; 95% confidence interval (95% CI), 1.19–1.80]. The following meta-analysis further confirmed this significant association for all genetic models but with significant between-study heterogeneity (all P for heterogeneity <0.1). By stratified analysis, we revealed that ethnicity, sample size, and tumor sites might constitute the source of heterogeneity. The cumulative analysis suggested that evident tendency to significant association was seen with adding study samples over time; whilst, sensitive analysis showed results before and after removal of each study were similar, indicating the highly stability of the current results. CONCLUSION: Results from our case-control study and the meta-analysis collectively confirmed the significant association of the variant rs4939827 with increased risk of colorectal cancer. Nevertheless, fine-mapping of the susceptibility loci defined by rs4939287 should be imposed to reveal causal variant. Public Library of Science 2012-03-21 /pmc/articles/PMC3310071/ /pubmed/22457752 http://dx.doi.org/10.1371/journal.pone.0033318 Text en Song et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Song, Qibin Zhu, Beibei Hu, Weiguo Cheng, Liming Gong, Hongyun Xu, Bin Zheng, Xiawen Zou, Li Zhong, Rong Duan, Shengyu Chen, Wei Rui, Rui Wu, Jing Miao, Xiaoping A Common SMAD7 Variant Is Associated with Risk of Colorectal Cancer: Evidence from a Case-Control Study and a Meta-Analysis |
title | A Common SMAD7 Variant Is Associated with Risk of Colorectal Cancer: Evidence from a Case-Control Study and a Meta-Analysis |
title_full | A Common SMAD7 Variant Is Associated with Risk of Colorectal Cancer: Evidence from a Case-Control Study and a Meta-Analysis |
title_fullStr | A Common SMAD7 Variant Is Associated with Risk of Colorectal Cancer: Evidence from a Case-Control Study and a Meta-Analysis |
title_full_unstemmed | A Common SMAD7 Variant Is Associated with Risk of Colorectal Cancer: Evidence from a Case-Control Study and a Meta-Analysis |
title_short | A Common SMAD7 Variant Is Associated with Risk of Colorectal Cancer: Evidence from a Case-Control Study and a Meta-Analysis |
title_sort | common smad7 variant is associated with risk of colorectal cancer: evidence from a case-control study and a meta-analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3310071/ https://www.ncbi.nlm.nih.gov/pubmed/22457752 http://dx.doi.org/10.1371/journal.pone.0033318 |
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