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Gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63
p53 and p63 are transcription factors -TFs- playing master roles in the DNA-damage response and in the development and maintenance of pluristratified epithelia, respectively. p53 mutations are common in epithelial tumors and HaCaT keratinocytes harbor two p53 alleles -H179Y and R282Q- with gain-of-f...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3326644/ https://www.ncbi.nlm.nih.gov/pubmed/22361592 |
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author | Martynova, Elena Pozzi, Silvia Basile, Valentina Dolfini, Diletta Zambelli, Federico Imbriano, Carol Pavesi, Giulio Mantovani, Roberto |
author_facet | Martynova, Elena Pozzi, Silvia Basile, Valentina Dolfini, Diletta Zambelli, Federico Imbriano, Carol Pavesi, Giulio Mantovani, Roberto |
author_sort | Martynova, Elena |
collection | PubMed |
description | p53 and p63 are transcription factors -TFs- playing master roles in the DNA-damage response and in the development and maintenance of pluristratified epithelia, respectively. p53 mutations are common in epithelial tumors and HaCaT keratinocytes harbor two p53 alleles -H179Y and R282Q- with gain-of-function (GOF) activity. Indeed, functional inactivation of mutp53 affects the growth rate of HaCaT. We investigated the strategy of mutp53, by performing ChIP-Seq experiments of mutp53 and p63 and analyzed the transcriptome after mutp53 inactivation. Mutp53 bind to 7135 locations in vivo, with a robust overlap with p63. De novo motifs discovery recovered a p53/p63RE with high information content in sites bound by p63 and mutp53/p63, but not by mutp53 alone: these sites are rather enriched in elements of other TFs. The HaCaT p63 locations are only partially overlapping with those of normal keratinocytes; importantly, and enriched in mutp53 sites which delineate a functionally different group of target genes. Our data favour a model whereby mutp53 GOF mutants act both by tethering growth-controlling TFs and highjacking p63 to new locations. |
format | Online Article Text |
id | pubmed-3326644 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-33266442012-04-18 Gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63 Martynova, Elena Pozzi, Silvia Basile, Valentina Dolfini, Diletta Zambelli, Federico Imbriano, Carol Pavesi, Giulio Mantovani, Roberto Oncotarget Brief Reports p53 and p63 are transcription factors -TFs- playing master roles in the DNA-damage response and in the development and maintenance of pluristratified epithelia, respectively. p53 mutations are common in epithelial tumors and HaCaT keratinocytes harbor two p53 alleles -H179Y and R282Q- with gain-of-function (GOF) activity. Indeed, functional inactivation of mutp53 affects the growth rate of HaCaT. We investigated the strategy of mutp53, by performing ChIP-Seq experiments of mutp53 and p63 and analyzed the transcriptome after mutp53 inactivation. Mutp53 bind to 7135 locations in vivo, with a robust overlap with p63. De novo motifs discovery recovered a p53/p63RE with high information content in sites bound by p63 and mutp53/p63, but not by mutp53 alone: these sites are rather enriched in elements of other TFs. The HaCaT p63 locations are only partially overlapping with those of normal keratinocytes; importantly, and enriched in mutp53 sites which delineate a functionally different group of target genes. Our data favour a model whereby mutp53 GOF mutants act both by tethering growth-controlling TFs and highjacking p63 to new locations. Impact Journals LLC 2012-02-22 /pmc/articles/PMC3326644/ /pubmed/22361592 Text en Copyright: © 2012 Martynova et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited |
spellingShingle | Brief Reports Martynova, Elena Pozzi, Silvia Basile, Valentina Dolfini, Diletta Zambelli, Federico Imbriano, Carol Pavesi, Giulio Mantovani, Roberto Gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63 |
title | Gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63 |
title_full | Gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63 |
title_fullStr | Gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63 |
title_full_unstemmed | Gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63 |
title_short | Gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63 |
title_sort | gain-of-function p53 mutants have widespread genomic locations partially overlapping with p63 |
topic | Brief Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3326644/ https://www.ncbi.nlm.nih.gov/pubmed/22361592 |
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