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Computing evolutionary distinctiveness indices in large scale analysis

We present optimal linear time algorithms for computing the Shapley values and 'heightened evolutionary distinctiveness' (HED) scores for the set of taxa in a phylogenetic tree. We demonstrate the efficiency of these new algorithms by applying them to a set of 10,000 reasonable 5139-specie...

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Detalles Bibliográficos
Autores principales: Martyn, Iain, Kuhn, Tyler S, Mooers, Arne O, Moulton, Vincent, Spillner, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3353162/
https://www.ncbi.nlm.nih.gov/pubmed/22502588
http://dx.doi.org/10.1186/1748-7188-7-6