Cargando…

Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli

The clustered regularly interspaced short palindromic repeats and their associated proteins (CRISPR/Cas) constitute a recently identified prokaryotic defense mechanism against invading nucleic acids. Activity of the CRISPR/Cas system comprises of three steps: (i) insertion of alien DNA sequences int...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yosef, Ido, Goren, Moran G., Qimron, Udi
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2012
Materias:	Molecular Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3384332/ https://www.ncbi.nlm.nih.gov/pubmed/22402487 http://dx.doi.org/10.1093/nar/gks216

Ejemplares similares

Highly active CRISPR-adaptation proteins revealed by a robust enrichment technology
por: Yosef, Ido, et al.
Publicado: (2023)

CRISPR adaptation biases explain preference for acquisition of foreign DNA
por: Levy, Asaf, et al.
Publicado: (2015)

Full shut-off of Escherichia coli RNA-polymerase by T7 phage requires a small phage-encoded DNA-binding protein
por: Tabib-Salazar, Aline, et al.
Publicado: (2017)

A phage mechanism for selective nicking of dUMP-containing DNA
por: Mahata, Tridib, et al.
Publicado: (2021)

Mechanism of CRISPR-RNA guided recognition of DNA targets in Escherichia coli
por: van Erp, Paul B.G., et al.
Publicado: (2015)

Primed CRISPR adaptation in Escherichia coli cells does not depend on conformational changes in the Cascade effector complex detected in Vitro
por: Krivoy, Andrey, et al.
Publicado: (2018)

The Streptococcus thermophilus CRISPR/Cas system provides immunity in Escherichia coli
por: Sapranauskas, Rimantas, et al.
Publicado: (2011)

Repeat Size Determination by Two Molecular Rulers in the Type I-E CRISPR Array
por: Goren, Moran G., et al.
Publicado: (2016)

An efficient, scarless, selection-free technology for phage engineering
por: Goren, Moran G., et al.
Publicado: (2023)

The action of Escherichia coli CRISPR–Cas system on lytic bacteriophages with different lifestyles and development strategies
por: Strotskaya, Alexandra, et al.
Publicado: (2017)

Effects of nucleoid proteins on DNA repression loop formation in Escherichia coli
por: Becker, Nicole A., et al.
Publicado: (2007)

Different genome stability proteins underpin primed and naïve adaptation in E. coli CRISPR-Cas immunity
por: Ivančić-Baće, Ivana, et al.
Publicado: (2015)

Measurement of the salt-dependent stabilization of partially open DNA by Escherichia coli SSB protein
por: Hatch, K., et al.
Publicado: (2008)

Mobile element warfare via CRISPR and anti-CRISPR in Pseudomonas aeruginosa
por: León, Lina M, et al.
Publicado: (2021)

CRISPR DNA elements controlling site-specific spacer integration and proper repeat length by a Type II CRISPR–Cas system
por: Kim, Jenny G, et al.
Publicado: (2019)

DNA motifs determining the accuracy of repeat duplication during CRISPR adaptation in Haloarcula hispanica
por: Wang, Rui, et al.
Publicado: (2016)

YacG from Escherichia coli is a specific endogenous inhibitor of DNA gyrase
por: Sengupta, Sugopa, et al.
Publicado: (2008)

The Cas6e ribonuclease is not required for interference and adaptation by the E. coli type I-E CRISPR-Cas system
por: Semenova, Ekaterina, et al.
Publicado: (2015)

Spacer-length DNA intermediates are associated with Cas1 in cells undergoing primed CRISPR adaptation
por: Musharova, Olga, et al.
Publicado: (2017)

Dissociation and re-association of RNA polymerase with DNA during osmotic stress response in Escherichia coli
por: Cagliero, Cedric, et al.
Publicado: (2013)

Single-nucleotide-resolution mapping of DNA gyrase cleavage sites across the Escherichia coli genome
por: Sutormin, Dmitry, et al.
Publicado: (2019)

Transcription factor distribution in Escherichia coli: studies with FNR protein
por: Grainger, David C., et al.
Publicado: (2007)

Phage T7 DNA mimic protein Ocr is a potent inhibitor of BREX defence
por: Isaev, Artem, et al.
Publicado: (2020)

Phage T7 DNA mimic protein Ocr is a potent inhibitor of BREX defence
por: Isaev, Artem, et al.
Publicado: (2020)

Codon reassignment in the Escherichia coli genetic code
por: Mukai, Takahito, et al.
Publicado: (2010)

Adaptation of the Haloarcula hispanica CRISPR-Cas system to a purified virus strictly requires a priming process
por: Li, Ming, et al.
Publicado: (2014)

BREX system of Escherichia coli distinguishes self from non-self by methylation of a specific DNA site
por: Gordeeva, Julia, et al.
Publicado: (2019)

Wobble decoding by the Escherichia coli selenocysteine insertion machinery
por: Xu, Jianqiang, et al.
Publicado: (2013)

Consequences of Cas9 cleavage in the chromosome of Escherichia coli
por: Cui, Lun, et al.
Publicado: (2016)

Association of nucleoid proteins with coding and non-coding segments of the Escherichia coli genome
por: Grainger, David C., et al.
Publicado: (2006)

Primed CRISPR DNA uptake in Pyrococcus furiosus
por: Garrett, Sandra, et al.
Publicado: (2020)

CRISPR-Cas adaptation in Escherichia coli
por: Mitić, Damjan, et al.
Publicado: (2023)

A novel nucleoid protein of Escherichia coli induced under anaerobiotic growth conditions
por: Teramoto, Jun, et al.
Publicado: (2010)

The C-terminal domain of Escherichia coli Hfq is required for regulation
por: Večerek, Branislav, et al.
Publicado: (2008)

The neutrophil-activating Dps protein of Helicobacter pylori, HP-NAP, adopts a mechanism different from Escherichia coli Dps to bind and condense DNA
por: Ceci, Pierpaolo, et al.
Publicado: (2007)

Anti-CRISPR AcrIF9 functions by inducing the CRISPR–Cas complex to bind DNA non-specifically
por: Lu, Wang-Ting, et al.
Publicado: (2021)

Distinctive contributions of the ribosomal P-site elements m(2)G966, m(5)C967 and the C-terminal tail of the S9 protein in the fidelity of initiation of translation in Escherichia coli
por: Arora, Smriti, et al.
Publicado: (2013)

An endogenous protein inhibitor, YjhX (TopAI), for topoisomerase I from Escherichia coli
por: Yamaguchi, Yoshihiro, et al.
Publicado: (2015)

The dual role of DksA protein in the regulation of Escherichia coli pArgX promoter
por: Łyżeń, Robert, et al.
Publicado: (2016)

Differential regulation by ppGpp versus pppGpp in Escherichia coli
por: Mechold, Undine, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_4qp25sb98smjtikpop9uop0667