Cargando…
A MicroRNA-7 Binding Site Polymorphism in HOXB5 Leads to Differential Gene Expression in Bladder Cancer
PURPOSE: To investigate the biological function of HOXB5 in human bladder cancer and explore whether the HOXB5 3′-UTR SNP (1010A/G), which is located within the microRNA-7 binding site, was correlated with clinical features of bladder cancer. METHODS: Expression of HOXB5 in 35 human bladder cancer t...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2012
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387002/ https://www.ncbi.nlm.nih.gov/pubmed/22768238 http://dx.doi.org/10.1371/journal.pone.0040127 |
_version_ | 1782237051581628416 |
---|---|
author | Luo, Junhua Cai, Qingqing Wang, Wei Huang, Hui Zeng, Hong He, Wang Deng, Weixi Yu, Hao Chan, Eddie NG, Chi-fai Huang, Jian Lin, Tianxin |
author_facet | Luo, Junhua Cai, Qingqing Wang, Wei Huang, Hui Zeng, Hong He, Wang Deng, Weixi Yu, Hao Chan, Eddie NG, Chi-fai Huang, Jian Lin, Tianxin |
author_sort | Luo, Junhua |
collection | PubMed |
description | PURPOSE: To investigate the biological function of HOXB5 in human bladder cancer and explore whether the HOXB5 3′-UTR SNP (1010A/G), which is located within the microRNA-7 binding site, was correlated with clinical features of bladder cancer. METHODS: Expression of HOXB5 in 35 human bladder cancer tissues and 8 cell lines were examined using real-time PCR and immunohistochemistry. Next, we explored the biological function of HOXB5 in vitro using cell proliferation, migration and colony formation assays. Using bioinformatics, a SNP (1010A/G) was found located within the microRNA-7 binding site in the 3′-UTR of HOXB5. Real-time PCR was used to test HOXB5 expression affected by different alleles. Finally, multivariate logistic regression analysis was used to determine the relationship between SNP (1010A/G) frequency and clinical features in 391 cases. RESULTS: HOXB5 was frequently over-expressed both in bladder cancer tissues and cell lines. Inhibition of HOXB5 suppressed the oncogenic function of cancer cells. Next, we demonstrated that a SNP (1010A/G), located within the microRNA-7 binding site in the 3′-UTR of HOXB5, could affect HOXB5 expression in bladder cancer mainly by differential binding activity of microRNA-7 and SNP-related mRNA stability. Finally, we also showed the frequency of 1010G genotype was higher in cancer group compared to normal controls and correlated with the risk of high grade and high stage. CONCLUSION: HOXB5 is overexpressed in bladder cancer. A miRNA-binding SNP (1010A/G) located within 3′-UTR of HOXB5 is associated with gene expression and may be a promising prognostic factor for bladder cancer. |
format | Online Article Text |
id | pubmed-3387002 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-33870022012-07-05 A MicroRNA-7 Binding Site Polymorphism in HOXB5 Leads to Differential Gene Expression in Bladder Cancer Luo, Junhua Cai, Qingqing Wang, Wei Huang, Hui Zeng, Hong He, Wang Deng, Weixi Yu, Hao Chan, Eddie NG, Chi-fai Huang, Jian Lin, Tianxin PLoS One Research Article PURPOSE: To investigate the biological function of HOXB5 in human bladder cancer and explore whether the HOXB5 3′-UTR SNP (1010A/G), which is located within the microRNA-7 binding site, was correlated with clinical features of bladder cancer. METHODS: Expression of HOXB5 in 35 human bladder cancer tissues and 8 cell lines were examined using real-time PCR and immunohistochemistry. Next, we explored the biological function of HOXB5 in vitro using cell proliferation, migration and colony formation assays. Using bioinformatics, a SNP (1010A/G) was found located within the microRNA-7 binding site in the 3′-UTR of HOXB5. Real-time PCR was used to test HOXB5 expression affected by different alleles. Finally, multivariate logistic regression analysis was used to determine the relationship between SNP (1010A/G) frequency and clinical features in 391 cases. RESULTS: HOXB5 was frequently over-expressed both in bladder cancer tissues and cell lines. Inhibition of HOXB5 suppressed the oncogenic function of cancer cells. Next, we demonstrated that a SNP (1010A/G), located within the microRNA-7 binding site in the 3′-UTR of HOXB5, could affect HOXB5 expression in bladder cancer mainly by differential binding activity of microRNA-7 and SNP-related mRNA stability. Finally, we also showed the frequency of 1010G genotype was higher in cancer group compared to normal controls and correlated with the risk of high grade and high stage. CONCLUSION: HOXB5 is overexpressed in bladder cancer. A miRNA-binding SNP (1010A/G) located within 3′-UTR of HOXB5 is associated with gene expression and may be a promising prognostic factor for bladder cancer. Public Library of Science 2012-06-29 /pmc/articles/PMC3387002/ /pubmed/22768238 http://dx.doi.org/10.1371/journal.pone.0040127 Text en Luo et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Luo, Junhua Cai, Qingqing Wang, Wei Huang, Hui Zeng, Hong He, Wang Deng, Weixi Yu, Hao Chan, Eddie NG, Chi-fai Huang, Jian Lin, Tianxin A MicroRNA-7 Binding Site Polymorphism in HOXB5 Leads to Differential Gene Expression in Bladder Cancer |
title | A MicroRNA-7 Binding Site Polymorphism in HOXB5 Leads to Differential Gene Expression in Bladder Cancer |
title_full | A MicroRNA-7 Binding Site Polymorphism in HOXB5 Leads to Differential Gene Expression in Bladder Cancer |
title_fullStr | A MicroRNA-7 Binding Site Polymorphism in HOXB5 Leads to Differential Gene Expression in Bladder Cancer |
title_full_unstemmed | A MicroRNA-7 Binding Site Polymorphism in HOXB5 Leads to Differential Gene Expression in Bladder Cancer |
title_short | A MicroRNA-7 Binding Site Polymorphism in HOXB5 Leads to Differential Gene Expression in Bladder Cancer |
title_sort | microrna-7 binding site polymorphism in hoxb5 leads to differential gene expression in bladder cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387002/ https://www.ncbi.nlm.nih.gov/pubmed/22768238 http://dx.doi.org/10.1371/journal.pone.0040127 |
work_keys_str_mv | AT luojunhua amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT caiqingqing amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT wangwei amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT huanghui amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT zenghong amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT hewang amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT dengweixi amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT yuhao amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT chaneddie amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT ngchifai amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT huangjian amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT lintianxin amicrorna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT luojunhua microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT caiqingqing microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT wangwei microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT huanghui microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT zenghong microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT hewang microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT dengweixi microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT yuhao microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT chaneddie microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT ngchifai microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT huangjian microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer AT lintianxin microrna7bindingsitepolymorphisminhoxb5leadstodifferentialgeneexpressioninbladdercancer |