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RY-Coding and Non-Homogeneous Models Can Ameliorate the Maximum-Likelihood Inferences From Nucleotide Sequence Data with Parallel Compositional Heterogeneity

In phylogenetic analyses of nucleotide sequences, ‘homogeneous’ substitution models, which assume the stationarity of base composition across a tree, are widely used, albeit individual sequences may bear distinctive base frequencies. In the worst-case scenario, a homogeneous model-based analysis can...

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Detalles Bibliográficos
Autores principales: Ishikawa, Sohta A., Inagaki, Yuji, Hashimoto, Tetsuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Libertas Academica 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3394461/
https://www.ncbi.nlm.nih.gov/pubmed/22798721
http://dx.doi.org/10.4137/EBO.S9017