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Insight into Temperature Dependence of GTPase Activity in Human Guanylate Binding Protein-1

Interferon-γ induced human guanylate binding protein-1(hGBP1) belongs to a family of dynamin related large GTPases. Unlike all other GTPases, hGBP1 hydrolyzes GTP to a mixture of GDP and GMP with GMP being the major product at 37°C but GDP became significant when the hydrolysis reaction was carried...

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Autores principales: Rani, Anjana, Pandita, Esha, Rahman, Safikur, Deep, Shashank, Sau, Apurba Kumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3394710/
https://www.ncbi.nlm.nih.gov/pubmed/22859948
http://dx.doi.org/10.1371/journal.pone.0040487
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author Rani, Anjana
Pandita, Esha
Rahman, Safikur
Deep, Shashank
Sau, Apurba Kumar
author_facet Rani, Anjana
Pandita, Esha
Rahman, Safikur
Deep, Shashank
Sau, Apurba Kumar
author_sort Rani, Anjana
collection PubMed
description Interferon-γ induced human guanylate binding protein-1(hGBP1) belongs to a family of dynamin related large GTPases. Unlike all other GTPases, hGBP1 hydrolyzes GTP to a mixture of GDP and GMP with GMP being the major product at 37°C but GDP became significant when the hydrolysis reaction was carried out at 15°C. The hydrolysis reaction in hGBP1 is believed to involve with a number of catalytic steps. To investigate the effect of temperature in the product formation and on the different catalytic complexes of hGBP1, we carried out temperature dependent GTPase assays, mutational analysis, chemical and thermal denaturation studies. The Arrhenius plot for both GDP and GMP interestingly showed nonlinear behaviour, suggesting that the product formation from the GTP-bound enzyme complex is associated with at least more than one step. The negative activation energy for GDP formation and GTPase assay with external GDP together indicate that GDP formation occurs through the reversible dissociation of GDP-bound enzyme dimer to monomer, which further reversibly dissociates to give the product. Denaturation studies of different catalytic complexes show that unlike other complexes the free energy of GDP-bound hGBP1 decreases significantly at lower temperature. GDP formation is found to be dependent on the free energy of the GDP-bound enzyme complex. The decrease in the free energy of this complex at low temperature compared to at high is the reason for higher GDP formation at low temperature. Thermal denaturation studies also suggest that the difference in the free energy of the GTP-bound enzyme dimer compared to its monomer plays a crucial role in the product formation; higher stability favours GMP but lower favours GDP. Thus, this study provides the first thermodynamic insight into the effect of temperature in the product formation of hGBP1.
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spelling pubmed-33947102012-08-02 Insight into Temperature Dependence of GTPase Activity in Human Guanylate Binding Protein-1 Rani, Anjana Pandita, Esha Rahman, Safikur Deep, Shashank Sau, Apurba Kumar PLoS One Research Article Interferon-γ induced human guanylate binding protein-1(hGBP1) belongs to a family of dynamin related large GTPases. Unlike all other GTPases, hGBP1 hydrolyzes GTP to a mixture of GDP and GMP with GMP being the major product at 37°C but GDP became significant when the hydrolysis reaction was carried out at 15°C. The hydrolysis reaction in hGBP1 is believed to involve with a number of catalytic steps. To investigate the effect of temperature in the product formation and on the different catalytic complexes of hGBP1, we carried out temperature dependent GTPase assays, mutational analysis, chemical and thermal denaturation studies. The Arrhenius plot for both GDP and GMP interestingly showed nonlinear behaviour, suggesting that the product formation from the GTP-bound enzyme complex is associated with at least more than one step. The negative activation energy for GDP formation and GTPase assay with external GDP together indicate that GDP formation occurs through the reversible dissociation of GDP-bound enzyme dimer to monomer, which further reversibly dissociates to give the product. Denaturation studies of different catalytic complexes show that unlike other complexes the free energy of GDP-bound hGBP1 decreases significantly at lower temperature. GDP formation is found to be dependent on the free energy of the GDP-bound enzyme complex. The decrease in the free energy of this complex at low temperature compared to at high is the reason for higher GDP formation at low temperature. Thermal denaturation studies also suggest that the difference in the free energy of the GTP-bound enzyme dimer compared to its monomer plays a crucial role in the product formation; higher stability favours GMP but lower favours GDP. Thus, this study provides the first thermodynamic insight into the effect of temperature in the product formation of hGBP1. Public Library of Science 2012-07-11 /pmc/articles/PMC3394710/ /pubmed/22859948 http://dx.doi.org/10.1371/journal.pone.0040487 Text en Rani et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Rani, Anjana
Pandita, Esha
Rahman, Safikur
Deep, Shashank
Sau, Apurba Kumar
Insight into Temperature Dependence of GTPase Activity in Human Guanylate Binding Protein-1
title Insight into Temperature Dependence of GTPase Activity in Human Guanylate Binding Protein-1
title_full Insight into Temperature Dependence of GTPase Activity in Human Guanylate Binding Protein-1
title_fullStr Insight into Temperature Dependence of GTPase Activity in Human Guanylate Binding Protein-1
title_full_unstemmed Insight into Temperature Dependence of GTPase Activity in Human Guanylate Binding Protein-1
title_short Insight into Temperature Dependence of GTPase Activity in Human Guanylate Binding Protein-1
title_sort insight into temperature dependence of gtpase activity in human guanylate binding protein-1
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3394710/
https://www.ncbi.nlm.nih.gov/pubmed/22859948
http://dx.doi.org/10.1371/journal.pone.0040487
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