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Association of Eleven Common, Low-Penetrance Colorectal Cancer Susceptibility Genetic Variants at Six Risk Loci with Clinical Outcome

BACKGROUND: Low-penetrance genetic variants have been increasingly recognized to influence the risk of tumor development. Risk variants for colorectal cancer (CRC) have been mapped to chromosome positions 8q23.3, 8q24, 9p24.1, 10p14, 11q23, 14q22.2, 15q13, 16q22.1, 18q21, 19q13.1 and 20p12.3. In par...

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Autores principales: Hoskins, Janelle M., Ong, Pei-Shi, Keku, Temitope O., Galanko, Joseph A., Martin, Christopher F., Coleman, Clint A., Wolfe, Michelle, Sandler, Robert S., McLeod, Howard L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3407042/
https://www.ncbi.nlm.nih.gov/pubmed/22848671
http://dx.doi.org/10.1371/journal.pone.0041954
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author Hoskins, Janelle M.
Ong, Pei-Shi
Keku, Temitope O.
Galanko, Joseph A.
Martin, Christopher F.
Coleman, Clint A.
Wolfe, Michelle
Sandler, Robert S.
McLeod, Howard L.
author_facet Hoskins, Janelle M.
Ong, Pei-Shi
Keku, Temitope O.
Galanko, Joseph A.
Martin, Christopher F.
Coleman, Clint A.
Wolfe, Michelle
Sandler, Robert S.
McLeod, Howard L.
author_sort Hoskins, Janelle M.
collection PubMed
description BACKGROUND: Low-penetrance genetic variants have been increasingly recognized to influence the risk of tumor development. Risk variants for colorectal cancer (CRC) have been mapped to chromosome positions 8q23.3, 8q24, 9p24.1, 10p14, 11q23, 14q22.2, 15q13, 16q22.1, 18q21, 19q13.1 and 20p12.3. In particular, the 8q24 single nucleotide polymorphism (SNP), rs6983267, has reproducibly been associated with the risk of developing CRC. As the CRC risk SNPs may also influence disease outcome, thus in this study, we evaluated whether they influence patient survival. METHODOLOGY/PRINCIPAL FINDINGS: DNA samples from 583 CRC patients enrolled in the prospective, North Carolina Cancer Care Outcomes Research and Surveillance Consortium Study (NC CanCORS) were genotyped for 11 CRC susceptibility SNPs at 6 CRC risk loci. Relationships between genotypes and patient survival were examined using Cox regression analysis. In multivariate analysis, patients homozygous for the CRC risk allele of rs7013278 or rs7014346 (both at 8 q24) were only nominally significant for poorer overall survival compared to patients homozygous for the protective allele (hazard ratio = 2.20 and 1.96, respectively; P<0.05). None of these associations, however, remained statistically significant after correction for multiple testing. The other nine susceptibility SNPs tested were not significantly associated with survival. CONCLUSIONS/SIGNIFICANCE: We did not find evidence of association of CRC risk variants with patient survival.
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spelling pubmed-34070422012-07-30 Association of Eleven Common, Low-Penetrance Colorectal Cancer Susceptibility Genetic Variants at Six Risk Loci with Clinical Outcome Hoskins, Janelle M. Ong, Pei-Shi Keku, Temitope O. Galanko, Joseph A. Martin, Christopher F. Coleman, Clint A. Wolfe, Michelle Sandler, Robert S. McLeod, Howard L. PLoS One Research Article BACKGROUND: Low-penetrance genetic variants have been increasingly recognized to influence the risk of tumor development. Risk variants for colorectal cancer (CRC) have been mapped to chromosome positions 8q23.3, 8q24, 9p24.1, 10p14, 11q23, 14q22.2, 15q13, 16q22.1, 18q21, 19q13.1 and 20p12.3. In particular, the 8q24 single nucleotide polymorphism (SNP), rs6983267, has reproducibly been associated with the risk of developing CRC. As the CRC risk SNPs may also influence disease outcome, thus in this study, we evaluated whether they influence patient survival. METHODOLOGY/PRINCIPAL FINDINGS: DNA samples from 583 CRC patients enrolled in the prospective, North Carolina Cancer Care Outcomes Research and Surveillance Consortium Study (NC CanCORS) were genotyped for 11 CRC susceptibility SNPs at 6 CRC risk loci. Relationships between genotypes and patient survival were examined using Cox regression analysis. In multivariate analysis, patients homozygous for the CRC risk allele of rs7013278 or rs7014346 (both at 8 q24) were only nominally significant for poorer overall survival compared to patients homozygous for the protective allele (hazard ratio = 2.20 and 1.96, respectively; P<0.05). None of these associations, however, remained statistically significant after correction for multiple testing. The other nine susceptibility SNPs tested were not significantly associated with survival. CONCLUSIONS/SIGNIFICANCE: We did not find evidence of association of CRC risk variants with patient survival. Public Library of Science 2012-07-27 /pmc/articles/PMC3407042/ /pubmed/22848671 http://dx.doi.org/10.1371/journal.pone.0041954 Text en © 2012 Hoskins et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Hoskins, Janelle M.
Ong, Pei-Shi
Keku, Temitope O.
Galanko, Joseph A.
Martin, Christopher F.
Coleman, Clint A.
Wolfe, Michelle
Sandler, Robert S.
McLeod, Howard L.
Association of Eleven Common, Low-Penetrance Colorectal Cancer Susceptibility Genetic Variants at Six Risk Loci with Clinical Outcome
title Association of Eleven Common, Low-Penetrance Colorectal Cancer Susceptibility Genetic Variants at Six Risk Loci with Clinical Outcome
title_full Association of Eleven Common, Low-Penetrance Colorectal Cancer Susceptibility Genetic Variants at Six Risk Loci with Clinical Outcome
title_fullStr Association of Eleven Common, Low-Penetrance Colorectal Cancer Susceptibility Genetic Variants at Six Risk Loci with Clinical Outcome
title_full_unstemmed Association of Eleven Common, Low-Penetrance Colorectal Cancer Susceptibility Genetic Variants at Six Risk Loci with Clinical Outcome
title_short Association of Eleven Common, Low-Penetrance Colorectal Cancer Susceptibility Genetic Variants at Six Risk Loci with Clinical Outcome
title_sort association of eleven common, low-penetrance colorectal cancer susceptibility genetic variants at six risk loci with clinical outcome
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3407042/
https://www.ncbi.nlm.nih.gov/pubmed/22848671
http://dx.doi.org/10.1371/journal.pone.0041954
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