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A flexible integrative approach based on random forest improves prediction of transcription factor binding sites

Transcription factor binding sites (TFBSs) are DNA sequences of 6–15 base pairs. Interaction of these TFBSs with transcription factors (TFs) is largely responsible for most spatiotemporal gene expression patterns. Here, we evaluate to what extent sequence-based prediction of TFBSs can be improved by...

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Detalles Bibliográficos
Autores principales: Hooghe, Bart, Broos, Stefan, van Roy, Frans, De Bleser, Pieter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3413102/
https://www.ncbi.nlm.nih.gov/pubmed/22492513
http://dx.doi.org/10.1093/nar/gks283