The effects of contig length and depth on the estimation of SNP frequencies, and the relative abundance of SNPs in protein-coding and non-coding transcripts of tiger salamanders (Ambystoma tigrinum)

BACKGROUND: Next-generation sequencing methods have contributed to rapid progress in the fields of genomics and population genetics. Using this high-throughput and cost-effective technology, a number of studies have estimated single nucleotide polymorphism (SNP) frequency by calculating the mean num...

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Detalles Bibliográficos
Autores principales: Eo, Soo Hyung, DeWoody, J Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3416719/
https://www.ncbi.nlm.nih.gov/pubmed/22716167
http://dx.doi.org/10.1186/1471-2164-13-259

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3416719/
https://www.ncbi.nlm.nih.gov/pubmed/22716167
http://dx.doi.org/10.1186/1471-2164-13-259

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