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Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions

In an ATP-dependent reaction, the Escherichia coli RecG helicase unwinds DNA junctions in vitro. We present evidence of a unique protein conformational change in the RecG helicase from an α-helix to a β-strand upon an ATP binding under dilute conditions using circular dichroism (CD) spectroscopy. In...

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Autores principales: Saxena, Sarika, Nagatoishi, Satoru, Miyoshi, Daisuke, Sugimoto, Naoki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3420092/
https://www.ncbi.nlm.nih.gov/pubmed/22919464
http://dx.doi.org/10.1155/2012/392039
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author Saxena, Sarika
Nagatoishi, Satoru
Miyoshi, Daisuke
Sugimoto, Naoki
author_facet Saxena, Sarika
Nagatoishi, Satoru
Miyoshi, Daisuke
Sugimoto, Naoki
author_sort Saxena, Sarika
collection PubMed
description In an ATP-dependent reaction, the Escherichia coli RecG helicase unwinds DNA junctions in vitro. We present evidence of a unique protein conformational change in the RecG helicase from an α-helix to a β-strand upon an ATP binding under dilute conditions using circular dichroism (CD) spectroscopy. In contrast, under molecular crowding conditions, the α-helical conformation was stable even upon an ATP binding. These distinct conformational behaviors were observed to be independent of Na(+) and Mg(2+). Interestingly, CD measurements demonstrated that the spectra of a frayed duplex decreased with increasing of the RecG concentration both under dilute and molecular crowding conditions in the presence of ATP, suggesting that RecG unwound the frayed duplex. Our findings raise the possibility that the α-helix and β-strand forms of RecG are a preactive and an active structure with the helicase activity, respectively.
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spelling pubmed-34200922012-08-23 Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions Saxena, Sarika Nagatoishi, Satoru Miyoshi, Daisuke Sugimoto, Naoki J Nucleic Acids Research Article In an ATP-dependent reaction, the Escherichia coli RecG helicase unwinds DNA junctions in vitro. We present evidence of a unique protein conformational change in the RecG helicase from an α-helix to a β-strand upon an ATP binding under dilute conditions using circular dichroism (CD) spectroscopy. In contrast, under molecular crowding conditions, the α-helical conformation was stable even upon an ATP binding. These distinct conformational behaviors were observed to be independent of Na(+) and Mg(2+). Interestingly, CD measurements demonstrated that the spectra of a frayed duplex decreased with increasing of the RecG concentration both under dilute and molecular crowding conditions in the presence of ATP, suggesting that RecG unwound the frayed duplex. Our findings raise the possibility that the α-helix and β-strand forms of RecG are a preactive and an active structure with the helicase activity, respectively. Hindawi Publishing Corporation 2012 2012-08-08 /pmc/articles/PMC3420092/ /pubmed/22919464 http://dx.doi.org/10.1155/2012/392039 Text en Copyright © 2012 Sarika Saxena et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Saxena, Sarika
Nagatoishi, Satoru
Miyoshi, Daisuke
Sugimoto, Naoki
Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions
title Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions
title_full Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions
title_fullStr Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions
title_full_unstemmed Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions
title_short Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions
title_sort structural and functional characterization of recg helicase under dilute and molecular crowding conditions
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3420092/
https://www.ncbi.nlm.nih.gov/pubmed/22919464
http://dx.doi.org/10.1155/2012/392039
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