RIsearch: fast RNA–RNA interaction search using a simplified nearest-neighbor energy model

Motivation: Regulatory, non-coding RNAs often function by forming a duplex with other RNAs. It is therefore of interest to predict putative RNA–RNA duplexes in silico on a genome-wide scale. Current computational methods for predicting these interactions range from fast complementary-based searches...

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Detalles Bibliográficos
Autores principales: Wenzel, Anne, Akbaşli, Erdinç, Gorodkin, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3476332/
https://www.ncbi.nlm.nih.gov/pubmed/22923300
http://dx.doi.org/10.1093/bioinformatics/bts519

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3476332/
https://www.ncbi.nlm.nih.gov/pubmed/22923300
http://dx.doi.org/10.1093/bioinformatics/bts519

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