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RIsearch: fast RNA–RNA interaction search using a simplified nearest-neighbor energy model
Motivation: Regulatory, non-coding RNAs often function by forming a duplex with other RNAs. It is therefore of interest to predict putative RNA–RNA duplexes in silico on a genome-wide scale. Current computational methods for predicting these interactions range from fast complementary-based searches...
Autores principales: | Wenzel, Anne, Akbaşli, Erdinç, Gorodkin, Jan |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3476332/ https://www.ncbi.nlm.nih.gov/pubmed/22923300 http://dx.doi.org/10.1093/bioinformatics/bts519 |
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