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Optimizing the GATA-3 position weight matrix to improve the identification of novel binding sites

BACKGROUND: The identifying of binding sites for transcription factors is a key component of gene regulatory network analysis. This is often done using position-weight matrices (PWMs). Because of the importance of in silico mapping of tentative binding sites, we previously developed an approach for...

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Detalles Bibliográficos
Autores principales: Nandi, Soumyadeep, Ioshikhes, Ilya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3481455/
https://www.ncbi.nlm.nih.gov/pubmed/22913572
http://dx.doi.org/10.1186/1471-2164-13-416