PanOCT: automated clustering of orthologs using conserved gene neighborhood for pan-genomic analysis of bacterial strains and closely related species

Pan-genome ortholog clustering tool (PanOCT) is a tool for pan-genomic analysis of closely related prokaryotic species or strains. PanOCT uses conserved gene neighborhood information to separate recently diverged paralogs into orthologous clusters where homology-only clustering methods cannot. The r...

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Detalles Bibliográficos
Autores principales: Fouts, Derrick E., Brinkac, Lauren, Beck, Erin, Inman, Jason, Sutton, Granger
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2012
Materias:
Methods Online
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526259/
https://www.ncbi.nlm.nih.gov/pubmed/22904089
http://dx.doi.org/10.1093/nar/gks757

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526259/
https://www.ncbi.nlm.nih.gov/pubmed/22904089
http://dx.doi.org/10.1093/nar/gks757

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