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Using the Fast Fourier Transform to Accelerate the Computational Search for RNA Conformational Switches
Using complex roots of unity and the Fast Fourier Transform, we design a new thermodynamics-based algorithm, FFTbor, that computes the Boltzmann probability that secondary structures differ by [Image: see text] base pairs from an arbitrary initial structure of a given RNA sequence. The algorithm, wh...
| Autores principales: | , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Public Library of Science
2012
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526635/ https://www.ncbi.nlm.nih.gov/pubmed/23284639 http://dx.doi.org/10.1371/journal.pone.0050506 |