NSeq: a multithreaded Java application for finding positioned nucleosomes from sequencing data

We introduce NSeq, a fast and efficient Java application for finding positioned nucleosomes from the high-throughput sequencing of MNase-digested mononucleosomal DNA. NSeq includes a user-friendly graphical interface, computes false discovery rates (FDRs) for candidate nucleosomes from Monte Carlo s...

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Detalles Bibliográficos
Autores principales: Nellore, Abhinav, Bobkov, Konstantin, Howe, Elizabeth, Pankov, Aleksandr, Diaz, Aaron, Song, Jun S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2013
Materias:
Genetics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3542818/
https://www.ncbi.nlm.nih.gov/pubmed/23335939
http://dx.doi.org/10.3389/fgene.2012.00320

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3542818/
https://www.ncbi.nlm.nih.gov/pubmed/23335939
http://dx.doi.org/10.3389/fgene.2012.00320

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