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NSeq: a multithreaded Java application for finding positioned nucleosomes from sequencing data
We introduce NSeq, a fast and efficient Java application for finding positioned nucleosomes from the high-throughput sequencing of MNase-digested mononucleosomal DNA. NSeq includes a user-friendly graphical interface, computes false discovery rates (FDRs) for candidate nucleosomes from Monte Carlo s...
Autores principales: | Nellore, Abhinav, Bobkov, Konstantin, Howe, Elizabeth, Pankov, Aleksandr, Diaz, Aaron, Song, Jun S. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3542818/ https://www.ncbi.nlm.nih.gov/pubmed/23335939 http://dx.doi.org/10.3389/fgene.2012.00320 |
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