Scaffolding low quality genomes using orthologous protein sequences

Motivation: The ready availability of next-generation sequencing has led to a situation where it is easy to produce very fragmentary genome assemblies. We present a pipeline, SWiPS (Scaffolding With Protein Sequences), that uses orthologous proteins to improve low quality genome assemblies. The prot...

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Detalles Bibliográficos
Autores principales: Li, Yang I., Copley, Richard R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3546802/
https://www.ncbi.nlm.nih.gov/pubmed/23162087
http://dx.doi.org/10.1093/bioinformatics/bts661

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3546802/
https://www.ncbi.nlm.nih.gov/pubmed/23162087
http://dx.doi.org/10.1093/bioinformatics/bts661

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