Normalized N50 assembly metric using gap-restricted co-linear chaining

BACKGROUND: For the development of genome assembly tools, some comprehensive and efficiently computable validation measures are required to assess the quality of the assembly. The mostly used N50 measure summarizes the assembly results by the length of the scaffold (or contig) overlapping the midpoi...

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Detalles Bibliográficos
Autores principales: Mäkinen, Veli, Salmela, Leena, Ylinen, Johannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2012
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3556137/
https://www.ncbi.nlm.nih.gov/pubmed/23031320
http://dx.doi.org/10.1186/1471-2105-13-255

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3556137/
https://www.ncbi.nlm.nih.gov/pubmed/23031320
http://dx.doi.org/10.1186/1471-2105-13-255

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