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McGenus: a Monte Carlo algorithm to predict RNA secondary structures with pseudoknots

We present McGenus, an algorithm to predict RNA secondary structures with pseudoknots. The method is based on a classification of RNA structures according to their topological genus. McGenus can treat sequences of up to 1000 bases and performs an advanced stochastic search of their minimum free ener...

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Detalles Bibliográficos
Autores principales: Bon, Michaël, Micheletti, Cristian, Orland, Henri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
RNA
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561945/
https://www.ncbi.nlm.nih.gov/pubmed/23248008
http://dx.doi.org/10.1093/nar/gks1204