Cargando…

Allelic mRNA expression imbalance in C-type lectins reveals a frequent regulatory SNP in the human surfactant protein A (SP-A) gene

Genetic variation in C-type lectins influences infectious disease susceptibility but remains poorly understood. We employed allelic mRNA expression imbalance (AEI) technology for SP-A1, SP-A2, SP-D, DC-SIGN, MRC1, and Dectin-1, expressed in human macrophages and/or lung tissues. Frequent AEI, an ind...

Descripción completa

Detalles Bibliográficos
Autores principales:	Azad, Abul K., Curtis, Amanda, Papp, Audrey, Webb, Amy, Knoell, Daren, Sadee, Wolfgang, Schlesinger, Larry S.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	2013
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3594410/ https://www.ncbi.nlm.nih.gov/pubmed/23328842 http://dx.doi.org/10.1038/gene.2012.61

Ejemplares similares

Elemental Ingredients in the Macrophage Cocktail: Role of ZIP8 in Host Response to Mycobacterium tuberculosis
por: Pyle, Charlie J., et al.
Publicado: (2017)

Challenges of Immune Response Diversity in the Human Population Concerning New Tuberculosis Diagnostics, Therapies, and Vaccines
por: Azad, Abul K., et al.
Publicado: (2020)

Haplotype-based profiling of subtle allelic imbalance with SNP arrays
por: Vattathil, Selina, et al.
Publicado: (2013)

AmpliSeq transcriptome analysis of human alveolar and monocyte-derived macrophages over time in response to Mycobacterium tuberculosis infection
por: Papp, Audrey C., et al.
Publicado: (2018)

Frequent Allelic Imbalance on Chromosome 18q21 in Early Superficial Colorectal Cancers
por: Akiyama, Yoshimitsu, et al.
Publicado: (1999)

Whole transcriptome RNA-Seq allelic expression in human brain
por: Smith, Ryan M, et al.
Publicado: (2013)

Zinc Modulates Endotoxin-Induced Human Macrophage Inflammation through ZIP8 Induction and C/EBPβ Inhibition
por: Pyle, Charlie J., et al.
Publicado: (2017)

Allelic expression imbalance of PIK3CA mutations is frequent in breast cancer and prognostically significant
por: Correia, Lizelle, et al.
Publicado: (2022)

Allelic imbalance sequencing reveals that single-nucleotide polymorphisms frequently alter microRNA-directed repression
por: Kim, Jinkuk, et al.
Publicado: (2009)

Allele-Selective Transcriptome Recruitment to Polysomes Primed for Translation: Protein-Coding and Noncoding RNAs, and RNA Isoforms
por: Mascarenhas, Roshan, et al.
Publicado: (2015)

Genome-wide analysis of allelic imbalance in prostate cancer using the Affymetrix 50K SNP mapping array
por: Tørring, N, et al.
Publicado: (2007)

Segmentation-based detection of allelic imbalance and loss-of-heterozygosity in cancer cells using whole genome SNP arrays
por: Staaf, Johan, et al.
Publicado: (2008)

Delimiting Allelic Imbalance of TYMS by Allele-Specific Analysis
por: Balboa-Beltrán, Emilia, et al.
Publicado: (2015)

A fast and accurate method to detect allelic genomic imbalances underlying mosaic rearrangements using SNP array data
por: González, Juan R, et al.
Publicado: (2011)

Oncogene Mutations, Copy Number Gains and Mutant Allele Specific Imbalance (MASI) Frequently Occur Together in Tumor Cells
por: Soh, Junichi, et al.
Publicado: (2009)

RNA sequencing of transcriptomes in human brain regions: protein-coding and non-coding RNAs, isoforms and alleles
por: Webb, Amy, et al.
Publicado: (2015)

MixHMM: Inferring Copy Number Variation and Allelic Imbalance Using SNP Arrays and Tumor Samples Mixed with Stromal Cells
por: Liu, Zongzhi, et al.
Publicado: (2010)

Allelic imbalance in CALR somatic mutagenesis
por: Harutyunyan, A S, et al.
Publicado: (2015)

Contribution of allelic imbalance to colorectal cancer
por: Palin, Kimmo, et al.
Publicado: (2018)

Allelic imbalance in human breast cancer
por: French, Juliet D., et al.
Publicado: (2017)

Essential Role of Zinc and Zinc Transporters in Myeloid Cell Function and Host Defense against Infection
por: Sapkota, Muna, et al.
Publicado: (2018)

Respiratory pharmacology: In defense of the lung: innovations to bolster or prevent acute and chronic lung diseases
por: Hoyt, Dale G, et al.
Publicado: (2006)

Resistance and Susceptibility Immune Factors at Play during Mycobacterium tuberculosis Infection of Macrophages
por: Simper, Jan D., et al.
Publicado: (2022)

Association of SNP–SNP Interactions of Surfactant Protein Genes with Pediatric Acute Respiratory Failure
por: Gandhi, Chintan K., et al.
Publicado: (2020)

AllelicImbalance: an R/ bioconductor package for detecting, managing, and visualizing allele expression imbalance data from RNA sequencing
por: Gådin, Jesper R., et al.
Publicado: (2015)

Imputation of Microsatellite Alleles from Dense SNP Genotypes for Parental Verification
por: McClure, Matthew, et al.
Publicado: (2012)

The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070
por: Shi, Meng, et al.
Publicado: (2016)

A hidden Markov approach for ascertaining cSNP genotypes from RNA sequence data in the presence of allelic imbalance by exploiting linkage disequilibrium
por: Steibel, Juan P, et al.
Publicado: (2015)

SNP–SNP Interactions of Surfactant Protein Genes in Persistent Respiratory Morbidity Susceptibility in Previously Healthy Children
por: Gandhi, Chintan K., et al.
Publicado: (2022)

Allelic imbalance of chromosome 6q in ovarian tumours.
por: Orphanos, V., et al.
Publicado: (1995)

Allelic Imbalances in Radiation—Associated Acute Myeloid Leukemia
por: Klymenko, Sergiy V., et al.
Publicado: (2011)

Allelic imbalance of somatic mutations in cancer genomes and transcriptomes
por: Rhee, Je-Keun, et al.
Publicado: (2017)

Replicate sequencing libraries are important for quantification of allelic imbalance
por: Mendelevich, Asia, et al.
Publicado: (2021)

Analyzing allele specific RNA expression using mixture models
por: Lu, Rong, et al.
Publicado: (2015)

Using SNP array to identify aneuploidy and segmental imbalance in translocation carriers
por: Xiong, B., et al.
Publicado: (2014)

Divalent Metal Uptake and the Role of ZIP8 in Host Defense Against Pathogens
por: Samuelson, Derrick R., et al.
Publicado: (2022)

Lung Surfactant Protein A (SP-A) Interactions with Model Lung Surfactant Lipids and an SP-B Fragment
por: Sarker, Muzaddid, et al.
Publicado: (2011)

Chromosome 11 allele imbalance and clinicopathological correlates in ovarian tumours.
por: Gabra, H., et al.
Publicado: (1995)

Allelic Imbalances on Chromosome 20 in Human Transitional Cell Carcinoma
por: Higashi, Shin, et al.
Publicado: (2000)

Allelic Imbalance of Recurrently Mutated Genes in Acute Myeloid Leukaemia
por: Batcha, Aarif M. N., et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_npg2ubl9h4v4afplce1gfo6r0c