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An Artificial Functional Family Filter in Homolog Searching in Next-generation Sequencing Metagenomics
In functional metagenomics, BLAST homology search is a common method to classify metagenomic reads into protein/domain sequence families such as Clusters of Orthologous Groups of proteins (COGs) in order to quantify the abundance of each COG in the community. The resulting functional profile of the...
Autores principales: | Du, Ruofei, Mercante, Donald, Fang, Zhide |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3597637/ https://www.ncbi.nlm.nih.gov/pubmed/23516532 http://dx.doi.org/10.1371/journal.pone.0058669 |
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