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A hybrid short read mapping accelerator

BACKGROUND: The rapid growth of short read datasets poses a new challenge to the short read mapping problem in terms of sensitivity and execution speed. Existing methods often use a restrictive error model for computing the alignments to improve speed, whereas more flexible error models are generall...

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Detalles Bibliográficos
Autores principales: Chen, Yupeng, Schmidt, Bertil, Maskell, Douglas L
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3598928/
https://www.ncbi.nlm.nih.gov/pubmed/23441908
http://dx.doi.org/10.1186/1471-2105-14-67