Construction of Customized Sub-Databases from NCBI-nr Database for Rapid Annotation of Huge Metagenomic Datasets Using a Combined BLAST and MEGAN Approach

We developed a fast method to construct local sub-databases from the NCBI-nr database for the quick similarity search and annotation of huge metagenomic datasets based on BLAST-MEGAN approach. A three-step sub-database annotation pipeline (SAP) was further proposed to conduct the annotation in a muc...

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Detalles Bibliográficos
Autores principales: Yu, Ke, Zhang, Tong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3613424/
https://www.ncbi.nlm.nih.gov/pubmed/23573212
http://dx.doi.org/10.1371/journal.pone.0059831

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3613424/
https://www.ncbi.nlm.nih.gov/pubmed/23573212
http://dx.doi.org/10.1371/journal.pone.0059831

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