Cargando…

Codon pairs of the HIV-1 vif gene correlate with CD4+ T cell count

BACKGROUND: The human APOBEC3G (A3G) protein activity is associated with innate immunity against HIV-1 by inducing high rates of guanosines to adenosines (G-to-A) mutations (viz., hypermutation) in the viral DNA. If hypermutation is not enough to disrupt the reading frames of viral genes, it may lik...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bizinoto, Maria Clara, Yabe, Shiori, Leal, Élcio, Kishino, Hirohisa, Martins, Leonardo de Oliveira, de Lima, Mariana Leão, Morais, Edsel Renata, Diaz, Ricardo Sobhie, Janini, Luiz Mário
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2013
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3637627/ https://www.ncbi.nlm.nih.gov/pubmed/23578255 http://dx.doi.org/10.1186/1471-2334-13-173

Ejemplares similares

Is the tryptophan codon of gene vif the Achilles’ heel of HIV-1?
por: Villanova, Fabiola, et al.
Publicado: (2020)

Phylogenetic Detection of Recombination with a Bayesian Prior on the Distance between Trees
por: de Oliveira Martins, Leonardo, et al.
Publicado: (2008)

Analysis of HIV-1 Protease Gene Reveals Frequent Multiple Infections Followed by Recombination among Drug Treated Individuals Living in São Paulo and Santos, Brazil
por: Nunes, Edsel Renata De Morais, et al.
Publicado: (2014)

Relaxation of Adaptive Evolution during the HIV-1 Infection Owing to Reduction of CD4+ T Cell Counts
por: Leal, Élcio, et al.
Publicado: (2012)

Effect of Vif in doxorubicin treated breast cancer cells
por: Bandarra, Susana, et al.
Publicado: (2021)

HIV Vif protein in docetaxel treatment of breast cancer cells
por: Cipriano, Pedro, et al.
Publicado: (2021)

Brookhaven : De l'or très vif
Publicado: (1992)

Codon Pairs are Phylogenetically Conserved: A comprehensive analysis of codon pairing conservation across the Tree of Life
por: Miller, Justin B., et al.
Publicado: (2020)

Interactions between HIV-1 Vif and human ElonginB-ElonginC are important for CBF-β binding to Vif
por: Wang, Xiaodan, et al.
Publicado: (2013)

Identification of a tripartite interaction between the N-terminus of HIV-1 Vif and CBFβ that is critical for Vif function
por: Desimmie, Belete A., et al.
Publicado: (2017)

HIV-1 Vif, APOBEC, and Intrinsic Immunity
por: Goila-Gaur, Ritu, et al.
Publicado: (2008)

Computational identification of rare codons of Escherichia coli based on codon pairs preference
por: Wu, Xianming, et al.
Publicado: (2010)

Requirement of HIV-1 Vif C-terminus for Vif-CBF-β interaction and assembly of CUL5-containing E3 ligase
por: Wang, Hong, et al.
Publicado: (2014)

Maedi–visna virus Vif protein uses motifs distinct from HIV-1 Vif to bind zinc and the cofactor required for A3 degradation
por: Knecht, Kirsten M., et al.
Publicado: (2020)

Correction: Analysis of the Origin and Evolutionary History of HIV-1 CRF28_BF and CRF29_BF Reveals a Decreasing Prevalence in the AIDS Epidemic of Brazil
por: Ristic, Natalia, et al.
Publicado: (2011)

Analysis of the Origin and Evolutionary History of HIV-1 CRF28_BF and CRF29_BF Reveals a Decreasing Prevalence in the AIDS Epidemic of Brazil
por: Ristic, Natalia, et al.
Publicado: (2011)

Is Hepatitis Delta infections important in Brazil?
por: Cicero, Maira Ferreira, et al.
Publicado: (2016)

Suppression of APOBEC3-mediated restriction of HIV-1 by Vif
por: Feng, Yuqing, et al.
Publicado: (2014)

Host Restriction of Lentiviruses and Viral Countermeasures: APOBEC3 and Vif
por: Jónsson, Stefán R., et al.
Publicado: (2013)

HIV-1 Escape from Small-Molecule Antagonism of Vif
por: Sharkey, Mark, et al.
Publicado: (2019)

Inhibition of ATM-directed antiviral responses by HIV-1 Vif
por: Wong, Hoi Tong, et al.
Publicado: (2023)

Preferred and avoided codon pairs in three domains of life
por: Tats, Age, et al.
Publicado: (2008)

Comparative context analysis of codon pairs on an ORFeome scale
por: Moura, Gabriela, et al.
Publicado: (2005)

Expression Level of HIV-1 Vif Can Be Fluctuated by Natural Nucleotide Variations in the vif-Coding and Regulatory SA1D2prox Sequences of the Proviral Genome
por: Doi, Naoya, et al.
Publicado: (2019)

Epigenetic Modulations in Activated Cells Early after HIV-1 Infection and Their Possible Functional Consequences
por: Maricato, Juliana T., et al.
Publicado: (2015)

An Evolutionary Perspective of Codon Usage Pattern, Dinucleotide Composition and Codon Pair Bias in Prunus Necrotic Ringspot Virus
por: Wang, Lingqi, et al.
Publicado: (2023)

Small molecules that inhibit Vif-induced degradation of APOBEC3G
por: Matsui, Masashi, et al.
Publicado: (2014)

Insight into the HIV-1 Vif SOCS-box–ElonginBC interaction
por: Lu, Zhisheng, et al.
Publicado: (2013)

Structure of the Vif-binding domain of the antiviral enzyme APOBEC3G
por: Kouno, Takahide, et al.
Publicado: (2015)

The link between adjacent codon pairs and mRNA stability
por: Harigaya, Yuriko, et al.
Publicado: (2017)

Bias at the third nucleotide of codon pairs in virus and host genomes
por: Plant, Ewan P., et al.
Publicado: (2022)

Tests for paired count outcomes
por: Proudfoot, James A, et al.
Publicado: (2018)

Codon pair optimization (CPO): a software tool for synthetic gene design based on codon pair bias to improve the expression of recombinant proteins in Pichia pastoris
por: Huang, Yide, et al.
Publicado: (2021)

Distinct signatures of codon and codon pair usage in 32 primary tumor types in the novel database CancerCoCoPUTs for cancer-specific codon usage
por: Meyer, Douglas, et al.
Publicado: (2021)

Analysis of the use of codon pairs in the HE gene of the ISA virus shows a correlation between bias in HPR codon-pair use and mortality rates caused by the virus
por: Tello, Mario, et al.
Publicado: (2013)

HIV-1 Vif and APOBEC3G: Multiple roads to one goal
por: Goncalves, Joao, et al.
Publicado: (2004)

Towards Inhibition of Vif-APOBEC3G Interaction: Which Protein to Target?
por: Cadima-Couto, Iris, et al.
Publicado: (2010)

MDM2 is a novel E3 ligase for HIV-1 Vif
por: Izumi, Taisuke, et al.
Publicado: (2009)

Degradation of the cancer genomic DNA deaminase APOBEC3B by SIV Vif
por: Land, Allison M., et al.
Publicado: (2015)

Determinants of FIV and HIV Vif sensitivity of feline APOBEC3 restriction factors
por: Zhang, Zeli, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_nnfvv9j81m9uhr0bd8nip7o8bo