IDBA-tran: a more robust de novo de Bruijn graph assembler for transcriptomes with uneven expression levels

Motivation: RNA sequencing based on next-generation sequencing technology is effective for analyzing transcriptomes. Like de novo genome assembly, de novo transcriptome assembly does not rely on any reference genome or additional annotation information, but is more difficult. In particular, isoforms...

Descripción completa

Detalles Bibliográficos
Autores principales: Peng, Yu, Leung, Henry C. M., Yiu, Siu-Ming, Lv, Ming-Ju, Zhu, Xin-Guang, Chin, Francis Y. L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Ismb/Eccb 2013 Proceedings Papers Committee July 21 to July 23, 2013, Berlin, Germany
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3694675/
https://www.ncbi.nlm.nih.gov/pubmed/23813001
http://dx.doi.org/10.1093/bioinformatics/btt219

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3694675/
https://www.ncbi.nlm.nih.gov/pubmed/23813001
http://dx.doi.org/10.1093/bioinformatics/btt219

Ejemplares similares