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An Algorithm for Calculating the Probability of Classes of Data Patterns on a Genealogy

Felsenstein's pruning algorithm allows one to calculate the probability of any particular data pattern arising on a phylogeny given a model of character evolution. Here we present a similar dynamic programming algorithm. Our algorithm treats the tree and model as known. The algorithm makes it f...

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Detalles Bibliográficos
Autores principales: Koch, Jordan M., Holder, Mark T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3712476/
https://www.ncbi.nlm.nih.gov/pubmed/23868168
http://dx.doi.org/10.1371/4fd1286980c08