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Rule–based regulatory and metabolic model for Quorum sensing in P. aeruginosa
BACKGROUND: In the pathogen P. aeruginosa, the formation of virulence factors is regulated via Quorum sensing signaling pathways. Due to the increasing number of strains that are resistant to antibiotics, there is a high interest to develop novel antiinfectives. In the combat of resistant bacteria,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3765737/ https://www.ncbi.nlm.nih.gov/pubmed/23965312 http://dx.doi.org/10.1186/1752-0509-7-81 |
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author | Schaadt, Nadine S Steinbach, Anke Hartmann, Rolf W Helms, Volkhard |
author_facet | Schaadt, Nadine S Steinbach, Anke Hartmann, Rolf W Helms, Volkhard |
author_sort | Schaadt, Nadine S |
collection | PubMed |
description | BACKGROUND: In the pathogen P. aeruginosa, the formation of virulence factors is regulated via Quorum sensing signaling pathways. Due to the increasing number of strains that are resistant to antibiotics, there is a high interest to develop novel antiinfectives. In the combat of resistant bacteria, selective blockade of the bacterial cell–to–cell communication (Quorum sensing) has gained special interest as anti–virulence strategy. Here, we modeled the las, rhl, and pqs Quorum sensing systems by a multi–level logical approach to analyze how enzyme inhibitors and receptor antagonists effect the formation of autoinducers and virulence factors. RESULTS: Our rule–based simulations fulfill the behavior expected from literature considering the external level of autoinducers. In the presence of PqsBCD inhibitors, the external HHQ and PQS levels are indeed clearly reduced. The magnitude of this effect strongly depends on the inhibition level. However, it seems that the pyocyanin pathway is incomplete. CONCLUSIONS: To match experimental observations we suggest a modified network topology in which PqsE and PqsR acts as receptors and an autoinducer as ligand that up–regulate pyocyanin in a concerted manner. While the PQS biosynthesis is more appropriate as target to inhibit the HHQ and PQS formation, blocking the receptor PqsR that regulates the biosynthesis reduces the pyocyanin level stronger. |
format | Online Article Text |
id | pubmed-3765737 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-37657372013-09-11 Rule–based regulatory and metabolic model for Quorum sensing in P. aeruginosa Schaadt, Nadine S Steinbach, Anke Hartmann, Rolf W Helms, Volkhard BMC Syst Biol Research Article BACKGROUND: In the pathogen P. aeruginosa, the formation of virulence factors is regulated via Quorum sensing signaling pathways. Due to the increasing number of strains that are resistant to antibiotics, there is a high interest to develop novel antiinfectives. In the combat of resistant bacteria, selective blockade of the bacterial cell–to–cell communication (Quorum sensing) has gained special interest as anti–virulence strategy. Here, we modeled the las, rhl, and pqs Quorum sensing systems by a multi–level logical approach to analyze how enzyme inhibitors and receptor antagonists effect the formation of autoinducers and virulence factors. RESULTS: Our rule–based simulations fulfill the behavior expected from literature considering the external level of autoinducers. In the presence of PqsBCD inhibitors, the external HHQ and PQS levels are indeed clearly reduced. The magnitude of this effect strongly depends on the inhibition level. However, it seems that the pyocyanin pathway is incomplete. CONCLUSIONS: To match experimental observations we suggest a modified network topology in which PqsE and PqsR acts as receptors and an autoinducer as ligand that up–regulate pyocyanin in a concerted manner. While the PQS biosynthesis is more appropriate as target to inhibit the HHQ and PQS formation, blocking the receptor PqsR that regulates the biosynthesis reduces the pyocyanin level stronger. BioMed Central 2013-08-21 /pmc/articles/PMC3765737/ /pubmed/23965312 http://dx.doi.org/10.1186/1752-0509-7-81 Text en Copyright © 2013 Schaadt et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Schaadt, Nadine S Steinbach, Anke Hartmann, Rolf W Helms, Volkhard Rule–based regulatory and metabolic model for Quorum sensing in P. aeruginosa |
title | Rule–based regulatory and metabolic model for Quorum sensing in P. aeruginosa |
title_full | Rule–based regulatory and metabolic model for Quorum sensing in P. aeruginosa |
title_fullStr | Rule–based regulatory and metabolic model for Quorum sensing in P. aeruginosa |
title_full_unstemmed | Rule–based regulatory and metabolic model for Quorum sensing in P. aeruginosa |
title_short | Rule–based regulatory and metabolic model for Quorum sensing in P. aeruginosa |
title_sort | rule–based regulatory and metabolic model for quorum sensing in p. aeruginosa |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3765737/ https://www.ncbi.nlm.nih.gov/pubmed/23965312 http://dx.doi.org/10.1186/1752-0509-7-81 |
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