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SW#–GPU-enabled exact alignments on genome scale
Summary: We propose SW#, a new CUDA graphical processor unit-enabled and memory-efficient implementation of dynamic programming algorithm, for local alignment. It can be used as either a stand-alone application or a library. Although there are other graphical processor unit implementations of the Sm...
Autores principales: | Korpar, Matija, Šikić, Mile |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3777108/ https://www.ncbi.nlm.nih.gov/pubmed/23864730 http://dx.doi.org/10.1093/bioinformatics/btt410 |
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