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An efficient strategy for TALEN-mediated genome engineering in Drosophila

In reverse genetics, a gene’s function is elucidated through targeted modifications in the coding region or associated DNA cis-regulatory elements. To this purpose, recently developed customizable transcription activator-like effector nucleases (TALENs) have proven an invaluable tool, allowing intro...

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Autores principales: Katsuyama, Tomonori, Akmammedov, Arslan, Seimiya, Makiko, Hess, Samuel C., Sievers, Cem, Paro, Renato
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3783190/
https://www.ncbi.nlm.nih.gov/pubmed/23877243
http://dx.doi.org/10.1093/nar/gkt638
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author Katsuyama, Tomonori
Akmammedov, Arslan
Seimiya, Makiko
Hess, Samuel C.
Sievers, Cem
Paro, Renato
author_facet Katsuyama, Tomonori
Akmammedov, Arslan
Seimiya, Makiko
Hess, Samuel C.
Sievers, Cem
Paro, Renato
author_sort Katsuyama, Tomonori
collection PubMed
description In reverse genetics, a gene’s function is elucidated through targeted modifications in the coding region or associated DNA cis-regulatory elements. To this purpose, recently developed customizable transcription activator-like effector nucleases (TALENs) have proven an invaluable tool, allowing introduction of double-strand breaks at predetermined sites in the genome. Here we describe a practical and efficient method for the targeted genome engineering in Drosophila. We demonstrate TALEN-mediated targeted gene integration and efficient identification of mutant flies using a traceable marker phenotype. Furthermore, we developed an easy TALEN assembly (easyT) method relying on simultaneous reactions of DNA Bae I digestion and ligation, enabling construction of complete TALENs from a monomer unit library in a single day. Taken together, our strategy with easyT and TALEN-plasmid microinjection simplifies mutant generation and enables isolation of desired mutant fly lines in the F(1) generation.
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spelling pubmed-37831902013-09-30 An efficient strategy for TALEN-mediated genome engineering in Drosophila Katsuyama, Tomonori Akmammedov, Arslan Seimiya, Makiko Hess, Samuel C. Sievers, Cem Paro, Renato Nucleic Acids Res Methods Online In reverse genetics, a gene’s function is elucidated through targeted modifications in the coding region or associated DNA cis-regulatory elements. To this purpose, recently developed customizable transcription activator-like effector nucleases (TALENs) have proven an invaluable tool, allowing introduction of double-strand breaks at predetermined sites in the genome. Here we describe a practical and efficient method for the targeted genome engineering in Drosophila. We demonstrate TALEN-mediated targeted gene integration and efficient identification of mutant flies using a traceable marker phenotype. Furthermore, we developed an easy TALEN assembly (easyT) method relying on simultaneous reactions of DNA Bae I digestion and ligation, enabling construction of complete TALENs from a monomer unit library in a single day. Taken together, our strategy with easyT and TALEN-plasmid microinjection simplifies mutant generation and enables isolation of desired mutant fly lines in the F(1) generation. Oxford University Press 2013-09 2013-07-22 /pmc/articles/PMC3783190/ /pubmed/23877243 http://dx.doi.org/10.1093/nar/gkt638 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Methods Online
Katsuyama, Tomonori
Akmammedov, Arslan
Seimiya, Makiko
Hess, Samuel C.
Sievers, Cem
Paro, Renato
An efficient strategy for TALEN-mediated genome engineering in Drosophila
title An efficient strategy for TALEN-mediated genome engineering in Drosophila
title_full An efficient strategy for TALEN-mediated genome engineering in Drosophila
title_fullStr An efficient strategy for TALEN-mediated genome engineering in Drosophila
title_full_unstemmed An efficient strategy for TALEN-mediated genome engineering in Drosophila
title_short An efficient strategy for TALEN-mediated genome engineering in Drosophila
title_sort efficient strategy for talen-mediated genome engineering in drosophila
topic Methods Online
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3783190/
https://www.ncbi.nlm.nih.gov/pubmed/23877243
http://dx.doi.org/10.1093/nar/gkt638
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