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Hydrogen-bond network and pH sensitivity in human transthyretin

Transthyretin (TTR) is a tetrameric protein. TTR misfolding and aggregation are associated with human amyloid diseases. Dissociation of the TTR tetramer is believed to be the rate-limiting step in the amyloid fibril formation cascade. Low pH is known to promote dissociation into monomer and the form...

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Autores principales: Yokoyama, Takeshi, Mizuguchi, Mineyuki, Nabeshima, Yuko, Kusaka, Katsuhiro, Yamada, Taro, Hosoya, Takaaki, Ohhara, Takashi, Kurihara, Kazuo, Tanaka, Ichiro, Niimura, Nobuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795539/
https://www.ncbi.nlm.nih.gov/pubmed/24121323
http://dx.doi.org/10.1107/S090904951302075X
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author Yokoyama, Takeshi
Mizuguchi, Mineyuki
Nabeshima, Yuko
Kusaka, Katsuhiro
Yamada, Taro
Hosoya, Takaaki
Ohhara, Takashi
Kurihara, Kazuo
Tanaka, Ichiro
Niimura, Nobuo
author_facet Yokoyama, Takeshi
Mizuguchi, Mineyuki
Nabeshima, Yuko
Kusaka, Katsuhiro
Yamada, Taro
Hosoya, Takaaki
Ohhara, Takashi
Kurihara, Kazuo
Tanaka, Ichiro
Niimura, Nobuo
author_sort Yokoyama, Takeshi
collection PubMed
description Transthyretin (TTR) is a tetrameric protein. TTR misfolding and aggregation are associated with human amyloid diseases. Dissociation of the TTR tetramer is believed to be the rate-limiting step in the amyloid fibril formation cascade. Low pH is known to promote dissociation into monomer and the formation of amyloid fibrils. In order to reveal the molecular mechanisms underlying pH sensitivity and structural stabilities of TTR, neutron diffraction studies were conducted using the IBARAKI Biological Crystal Diffractometer with the time-of-flight method. Crystals for the neutron diffraction experiments were grown up to 2.5 mm(3) for four months. The neutron crystal structure solved at 2.0 Å revealed the protonation states of His88 and the detailed hydrogen-bond network depending on the protonation states of His88. This hydrogen-bond network is involved in monomer–monomer and dimer–dimer interactions, suggesting that the double protonation of His88 by acidification breaks the hydrogen-bond network and causes the destabilization of the TTR tetramer. Structural comparison with the X-ray crystal structure at acidic pH identified the three amino acid residues responsible for the pH sensitivity of TTR. Our neutron model provides insights into the molecular stability related to amyloidosis.
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spelling pubmed-37955392013-10-15 Hydrogen-bond network and pH sensitivity in human transthyretin Yokoyama, Takeshi Mizuguchi, Mineyuki Nabeshima, Yuko Kusaka, Katsuhiro Yamada, Taro Hosoya, Takaaki Ohhara, Takashi Kurihara, Kazuo Tanaka, Ichiro Niimura, Nobuo J Synchrotron Radiat Diffraction Structural Biology Transthyretin (TTR) is a tetrameric protein. TTR misfolding and aggregation are associated with human amyloid diseases. Dissociation of the TTR tetramer is believed to be the rate-limiting step in the amyloid fibril formation cascade. Low pH is known to promote dissociation into monomer and the formation of amyloid fibrils. In order to reveal the molecular mechanisms underlying pH sensitivity and structural stabilities of TTR, neutron diffraction studies were conducted using the IBARAKI Biological Crystal Diffractometer with the time-of-flight method. Crystals for the neutron diffraction experiments were grown up to 2.5 mm(3) for four months. The neutron crystal structure solved at 2.0 Å revealed the protonation states of His88 and the detailed hydrogen-bond network depending on the protonation states of His88. This hydrogen-bond network is involved in monomer–monomer and dimer–dimer interactions, suggesting that the double protonation of His88 by acidification breaks the hydrogen-bond network and causes the destabilization of the TTR tetramer. Structural comparison with the X-ray crystal structure at acidic pH identified the three amino acid residues responsible for the pH sensitivity of TTR. Our neutron model provides insights into the molecular stability related to amyloidosis. International Union of Crystallography 2013-11-01 2013-09-29 /pmc/articles/PMC3795539/ /pubmed/24121323 http://dx.doi.org/10.1107/S090904951302075X Text en © Takeshi Yokoyama et al. 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Diffraction Structural Biology
Yokoyama, Takeshi
Mizuguchi, Mineyuki
Nabeshima, Yuko
Kusaka, Katsuhiro
Yamada, Taro
Hosoya, Takaaki
Ohhara, Takashi
Kurihara, Kazuo
Tanaka, Ichiro
Niimura, Nobuo
Hydrogen-bond network and pH sensitivity in human transthyretin
title Hydrogen-bond network and pH sensitivity in human transthyretin
title_full Hydrogen-bond network and pH sensitivity in human transthyretin
title_fullStr Hydrogen-bond network and pH sensitivity in human transthyretin
title_full_unstemmed Hydrogen-bond network and pH sensitivity in human transthyretin
title_short Hydrogen-bond network and pH sensitivity in human transthyretin
title_sort hydrogen-bond network and ph sensitivity in human transthyretin
topic Diffraction Structural Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795539/
https://www.ncbi.nlm.nih.gov/pubmed/24121323
http://dx.doi.org/10.1107/S090904951302075X
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