Cargando…

Mining bacterial genomes for novel arylesterase activity

One hundred and seventy‐one genes encoding potential esterases from 11 bacterial genomes were cloned and overexpressed in Escherichia coli; 74 of the clones produced soluble proteins. All 74 soluble proteins were purified and screened for esterase activity; 36 proteins showed carboxyl esterase activ...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Lijun, Mavisakalyan, Valentina, Tillier, Elisabeth R. M., Clark, Greg W., Savchenko, Alexei V., Yakunin, Alexander F., Master, Emma R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3815341/
https://www.ncbi.nlm.nih.gov/pubmed/21255363
http://dx.doi.org/10.1111/j.1751-7915.2010.00185.x
_version_ 1782289408782761984
author Wang, Lijun
Mavisakalyan, Valentina
Tillier, Elisabeth R. M.
Clark, Greg W.
Savchenko, Alexei V.
Yakunin, Alexander F.
Master, Emma R.
author_facet Wang, Lijun
Mavisakalyan, Valentina
Tillier, Elisabeth R. M.
Clark, Greg W.
Savchenko, Alexei V.
Yakunin, Alexander F.
Master, Emma R.
author_sort Wang, Lijun
collection PubMed
description One hundred and seventy‐one genes encoding potential esterases from 11 bacterial genomes were cloned and overexpressed in Escherichia coli; 74 of the clones produced soluble proteins. All 74 soluble proteins were purified and screened for esterase activity; 36 proteins showed carboxyl esterase activity on short‐chain esters, 17 demonstrated arylesterase activity, while 38 proteins did not exhibit any activity towards the test substrates. Esterases from Rhodopseudomonas palustris (RpEST‐1, RpEST‐2 and RpEST‐3), Pseudomonas putida (PpEST‐1, PpEST‐2 and PpEST‐3), Pseudomonas aeruginosa (PaEST‐1) and Streptomyces avermitilis (SavEST‐1) were selected for detailed biochemical characterization. All of the enzymes showed optimal activity at neutral or alkaline pH, and the half‐life of each enzyme at 50°C ranged from < 5 min to over 5 h. PpEST‐3, RpEST‐1 and RpEST‐2 demonstrated the highest specific activity with pNP‐esters; these enzymes were also among the most stable at 50°C and in the presence of detergents, polar and non‐polar organic solvents, and imidazolium ionic liquids. Accordingly, these enzymes are particularly interesting targets for subsequent application trials. Finally, biochemical and bioinformatic analyses were compared to reveal sequence features that could be correlated to enzymes with arylesterase activity, facilitating subsequent searches for new esterases in microbial genome sequences.
format Online
Article
Text
id pubmed-3815341
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Blackwell Publishing Ltd
record_format MEDLINE/PubMed
spelling pubmed-38153412014-02-12 Mining bacterial genomes for novel arylesterase activity Wang, Lijun Mavisakalyan, Valentina Tillier, Elisabeth R. M. Clark, Greg W. Savchenko, Alexei V. Yakunin, Alexander F. Master, Emma R. Microb Biotechnol Research Articles One hundred and seventy‐one genes encoding potential esterases from 11 bacterial genomes were cloned and overexpressed in Escherichia coli; 74 of the clones produced soluble proteins. All 74 soluble proteins were purified and screened for esterase activity; 36 proteins showed carboxyl esterase activity on short‐chain esters, 17 demonstrated arylesterase activity, while 38 proteins did not exhibit any activity towards the test substrates. Esterases from Rhodopseudomonas palustris (RpEST‐1, RpEST‐2 and RpEST‐3), Pseudomonas putida (PpEST‐1, PpEST‐2 and PpEST‐3), Pseudomonas aeruginosa (PaEST‐1) and Streptomyces avermitilis (SavEST‐1) were selected for detailed biochemical characterization. All of the enzymes showed optimal activity at neutral or alkaline pH, and the half‐life of each enzyme at 50°C ranged from < 5 min to over 5 h. PpEST‐3, RpEST‐1 and RpEST‐2 demonstrated the highest specific activity with pNP‐esters; these enzymes were also among the most stable at 50°C and in the presence of detergents, polar and non‐polar organic solvents, and imidazolium ionic liquids. Accordingly, these enzymes are particularly interesting targets for subsequent application trials. Finally, biochemical and bioinformatic analyses were compared to reveal sequence features that could be correlated to enzymes with arylesterase activity, facilitating subsequent searches for new esterases in microbial genome sequences. Blackwell Publishing Ltd 2010-11 2010-10-22 /pmc/articles/PMC3815341/ /pubmed/21255363 http://dx.doi.org/10.1111/j.1751-7915.2010.00185.x Text en Copyright © 2010 The Authors. Journal compilation © 2010 Society for Applied Microbiology and Blackwell Publishing Ltd
spellingShingle Research Articles
Wang, Lijun
Mavisakalyan, Valentina
Tillier, Elisabeth R. M.
Clark, Greg W.
Savchenko, Alexei V.
Yakunin, Alexander F.
Master, Emma R.
Mining bacterial genomes for novel arylesterase activity
title Mining bacterial genomes for novel arylesterase activity
title_full Mining bacterial genomes for novel arylesterase activity
title_fullStr Mining bacterial genomes for novel arylesterase activity
title_full_unstemmed Mining bacterial genomes for novel arylesterase activity
title_short Mining bacterial genomes for novel arylesterase activity
title_sort mining bacterial genomes for novel arylesterase activity
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3815341/
https://www.ncbi.nlm.nih.gov/pubmed/21255363
http://dx.doi.org/10.1111/j.1751-7915.2010.00185.x
work_keys_str_mv AT wanglijun miningbacterialgenomesfornovelarylesteraseactivity
AT mavisakalyanvalentina miningbacterialgenomesfornovelarylesteraseactivity
AT tillierelisabethrm miningbacterialgenomesfornovelarylesteraseactivity
AT clarkgregw miningbacterialgenomesfornovelarylesteraseactivity
AT savchenkoalexeiv miningbacterialgenomesfornovelarylesteraseactivity
AT yakuninalexanderf miningbacterialgenomesfornovelarylesteraseactivity
AT masteremmar miningbacterialgenomesfornovelarylesteraseactivity