Cargando…

Nucleotide-induced asymmetry within ATPase activator ring drives σ54–RNAP interaction and ATP hydrolysis

It is largely unknown how the typical homomeric ring geometry of ATPases associated with various cellular activities enables them to perform mechanical work. Small-angle solution X-ray scattering, crystallography, and electron microscopy (EM) reconstructions revealed that partial ATP occupancy cause...

Descripción completa

Detalles Bibliográficos
Autores principales:	Sysoeva, Tatyana A., Chowdhury, Saikat, Guo, Liang, Nixon, B. Tracy
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory Press 2013
Materias:	Research Paper
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3841738/ https://www.ncbi.nlm.nih.gov/pubmed/24240239 http://dx.doi.org/10.1101/gad.229385.113

Ejemplares similares

Breaking symmetry in multimeric ATPase motors
por: Sysoeva, Tatyana A, et al.
Publicado: (2014)

Comparative analysis of activator-Eσ(54) complexes formed with nucleotide-metal fluoride analogues
por: Burrows, Patricia C., et al.
Publicado: (2009)

Genome-wide mapping of the distribution of CarD, RNAP σ(A), and RNAP β on the Mycobacterium smegmatis chromosome using chromatin immunoprecipitation sequencing
por: Landick, Robert, et al.
Publicado: (2014)

Formation of MgF(3)(−)-dependent complexes between an AAA(+) ATPase and σ(54)
por: Zhang, Nan, et al.
Publicado: (2012)

Dissociation of clathrin coats coupled to the hydrolysis of ATP: role of an uncoating ATPase
Publicado: (1984)

Genomic reconstruction of σ(54) regulons in Clostridiales
por: Nie, Xiaoqun, et al.
Publicado: (2019)

σ(54)-dependent regulome in Desulfovibrio vulgaris Hildenborough
por: Kazakov, Alexey E., et al.
Publicado: (2015)

Mechanisms of σ(54)-Dependent Transcription Initiation and Regulation
por: Danson, Amy E., et al.
Publicado: (2019)

The Regulatory Functions of σ(54) Factor in Phytopathogenic Bacteria
por: Yu, Chao, et al.
Publicado: (2021)

Rotary mechanism of V/A-ATPases—how is ATP hydrolysis converted into a mechanical step rotation in rotary ATPases?
por: Yokoyama, Ken
Publicado: (2023)

ATP hydrolysis assists phosphate release and promotes reaction ordering in F(1)-ATPase
por: Li, Chun-Biu, et al.
Publicado: (2015)

Catalytic Mechanism of ATP Hydrolysis in the ATPase Domain of Human DNA Topoisomerase IIα
por: Ogrizek, Mitja, et al.
Publicado: (2022)

iProm-Sigma54: A CNN Base Prediction Tool for σ(54) Promoters
por: Shujaat, Muhammad, et al.
Publicado: (2023)

Regulation of Eukaryotic RNAPs Activities by Phosphorylation
por: González-Jiménez, Araceli, et al.
Publicado: (2021)

σ(54) (σ(L)) plays a central role in carbon metabolism in the industrially relevant Clostridium beijerinckii
por: Hocq, Rémi, et al.
Publicado: (2019)

Ontogeny of ATP hydrolysis and isoform expression of the Plasma Membrane Ca(2+)-ATPase in mouse brain
por: Marcos, Daniel, et al.
Publicado: (2009)

The σ(54) system directly regulates bacterial natural product genes
por: Ma, Muqing, et al.
Publicado: (2021)

Lytic Water Dynamics Reveal Evolutionarily Conserved Mechanisms of ATP Hydrolysis by TIP49 AAA+ ATPases
por: Afanasyeva, Arina, et al.
Publicado: (2014)

Beyond binding change: the molecular mechanism of ATP hydrolysis by F(1)-ATPase and its biochemical consequences
por: Nath, Sunil
Publicado: (2023)

RAD54 N-terminal domain is a DNA sensor that couples ATP hydrolysis with branch migration of Holliday junctions
por: Goyal, Nadish, et al.
Publicado: (2018)

Conservation of σ(28)-Dependent Non-Coding RNA Paralogs and Predicted σ(54)-Dependent Targets in Thermophilic Campylobacter Species
por: Le, My Thanh, et al.
Publicado: (2015)

Genome wide interactions of wild-type and activator bypass forms of σ54
por: Schaefer, Jorrit, et al.
Publicado: (2015)

Deciphering Intrinsic Inter-subunit Couplings that Lead to Sequential Hydrolysis of F(1)-ATPase Ring
por: Dai, Liqiang, et al.
Publicado: (2017)

N-ethylmaleimide-sensitive fusion protein: a trimeric ATPase whose hydrolysis of ATP is required for membrane fusion
Publicado: (1994)

ATP2, The essential P4-ATPase of malaria parasites, catalyzes lipid-stimulated ATP hydrolysis in complex with a Cdc50 β-subunit
por: Lamy, Anaïs, et al.
Publicado: (2021)

Single-molecule observation of nucleotide induced conformational changes in basal SecA-ATP hydrolysis
por: Chada, Nagaraju, et al.
Publicado: (2018)

ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer
por: Abreu, Bárbara, et al.
Publicado: (2021)

Regulation of phenylacetic acid uptake is σ(54 )dependent in Pseudomonas putida CA-3
por: O' Leary, Niall D, et al.
Publicado: (2011)

The role of the conserved phenylalanine in the σ(54)-interacting GAFTGA motif of bacterial enhancer binding proteins
por: Zhang, Nan, et al.
Publicado: (2009)

Global gene expression under nitrogen starvation in Xylella fastidiosa: contribution of the σ(54 )regulon
por: da Silva Neto, José F, et al.
Publicado: (2010)

Genome-Scale Mapping of Escherichia coli σ(54) Reveals Widespread, Conserved Intragenic Binding
por: Bonocora, Richard P., et al.
Publicado: (2015)

Structural insights into ATP hydrolysis by the MoxR ATPase RavA and the LdcI-RavA cage-like complex
por: Jessop, Matthew, et al.
Publicado: (2020)

Mechanism of ATP hydrolysis dependent rotation of bacterial ATP synthase
por: Nakano, Atsuki, et al.
Publicado: (2023)

The CoxD Protein, a Novel AAA+ ATPase Involved in Metal Cluster Assembly: Hydrolysis of Nucleotide-Triphosphates and Oligomerization
por: Maisel, Tobias, et al.
Publicado: (2012)

ATP-Binding and Hydrolysis in Inflammasome Activation
por: Sandall, Christina F., et al.
Publicado: (2020)

Structures and mechanisms of actin ATP hydrolysis
por: Kanematsu, Yusuke, et al.
Publicado: (2022)

ChIP-exo interrogation of Crp, DNA, and RNAP holoenzyme interactions
por: Latif, Haythem, et al.
Publicado: (2018)

Generalized (σ , τ) higher derivations in prime rings
por: Ashraf, Mohammad, et al.
Publicado: (2012)

Structural snapshots of the kinesin‐2 OSM‐3 along its nucleotide cycle: implications for the ATP hydrolysis mechanism
por: Varela, Paloma F., et al.
Publicado: (2021)

Conncreting of PM54 beam ring.
por: CERN photo service
Publicado: (2000)

Cannot write session to /tmp/vufind_sessions/sess_456ett4urtv18hbad5f9g83i3v