SSW Library: An SIMD Smith-Waterman C/C++ Library for Use in Genomic Applications

BACKGROUND: The Smith-Waterman algorithm, which produces the optimal pairwise alignment between two sequences, is frequently used as a key component of fast heuristic read mapping and variation detection tools for next-generation sequencing data. Though various fast Smith-Waterman implementations ar...

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Detalles Bibliográficos
Autores principales: Zhao, Mengyao, Lee, Wan-Ping, Garrison, Erik P., Marth, Gabor T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3852983/
https://www.ncbi.nlm.nih.gov/pubmed/24324759
http://dx.doi.org/10.1371/journal.pone.0082138

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3852983/
https://www.ncbi.nlm.nih.gov/pubmed/24324759
http://dx.doi.org/10.1371/journal.pone.0082138

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