When Whole-Genome Alignments Just Won't Work: kSNP v2 Software for Alignment-Free SNP Discovery and Phylogenetics of Hundreds of Microbial Genomes

Effective use of rapid and inexpensive whole genome sequencing for microbes requires fast, memory efficient bioinformatics tools for sequence comparison. The kSNP v2 software finds single nucleotide polymorphisms (SNPs) in whole genome data. kSNP v2 has numerous improvements over kSNP v1 including S...

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Detalles Bibliográficos
Autores principales: Gardner, Shea N., Hall, Barry G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857212/
https://www.ncbi.nlm.nih.gov/pubmed/24349125
http://dx.doi.org/10.1371/journal.pone.0081760

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857212/
https://www.ncbi.nlm.nih.gov/pubmed/24349125
http://dx.doi.org/10.1371/journal.pone.0081760

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