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Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors

Protein synthesis must rapidly and repeatedly discriminate between a single correct and many incorrect aminoacyl-tRNAs. We have attempted to measure the frequencies of all possible missense errors by tRNA[Image: see text], tRNA[Image: see text] and tRNA[Image: see text]. The most frequent errors inv...

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Autores principales: Manickam, Nandini, Nag, Nabanita, Abbasi, Aleeza, Patel, Kishan, Farabaugh, Philip J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3866648/
https://www.ncbi.nlm.nih.gov/pubmed/24249223
http://dx.doi.org/10.1261/rna.039792.113
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author Manickam, Nandini
Nag, Nabanita
Abbasi, Aleeza
Patel, Kishan
Farabaugh, Philip J.
author_facet Manickam, Nandini
Nag, Nabanita
Abbasi, Aleeza
Patel, Kishan
Farabaugh, Philip J.
author_sort Manickam, Nandini
collection PubMed
description Protein synthesis must rapidly and repeatedly discriminate between a single correct and many incorrect aminoacyl-tRNAs. We have attempted to measure the frequencies of all possible missense errors by tRNA[Image: see text], tRNA[Image: see text] and tRNA[Image: see text]. The most frequent errors involve three types of mismatched nucleotide pairs, U•U, U•C, or U•G, all of which can form a noncanonical base pair with geometry similar to that of the canonical U•A or C•G Watson–Crick pairs. Our system is sensitive enough to measure errors at other potential mismatches that occur at frequencies as low as 1 in 500,000 codons. The ribosome appears to discriminate this efficiently against any pair with non-Watson–Crick geometry. This extreme accuracy may be necessary to allow discrimination against the errors involving near Watson–Crick pairing.
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spelling pubmed-38666482015-01-01 Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors Manickam, Nandini Nag, Nabanita Abbasi, Aleeza Patel, Kishan Farabaugh, Philip J. RNA Articles Protein synthesis must rapidly and repeatedly discriminate between a single correct and many incorrect aminoacyl-tRNAs. We have attempted to measure the frequencies of all possible missense errors by tRNA[Image: see text], tRNA[Image: see text] and tRNA[Image: see text]. The most frequent errors involve three types of mismatched nucleotide pairs, U•U, U•C, or U•G, all of which can form a noncanonical base pair with geometry similar to that of the canonical U•A or C•G Watson–Crick pairs. Our system is sensitive enough to measure errors at other potential mismatches that occur at frequencies as low as 1 in 500,000 codons. The ribosome appears to discriminate this efficiently against any pair with non-Watson–Crick geometry. This extreme accuracy may be necessary to allow discrimination against the errors involving near Watson–Crick pairing. Cold Spring Harbor Laboratory Press 2014-01 /pmc/articles/PMC3866648/ /pubmed/24249223 http://dx.doi.org/10.1261/rna.039792.113 Text en © 2013 Manickam et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society http://creativecommons.org/licenses/by-nc/3.0/ This article is distributed exclusively by the RNA Society for the first 12 months after the full-issue publication date (see http://rnajournal.cshlp.org/site/misc/terms.xhtml). After 12 months, it is available under a Creative Commons License (Attribution-NonCommercial 3.0 Unported), as described at http://creativecommons.org/licenses/by-nc/3.0/.
spellingShingle Articles
Manickam, Nandini
Nag, Nabanita
Abbasi, Aleeza
Patel, Kishan
Farabaugh, Philip J.
Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors
title Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors
title_full Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors
title_fullStr Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors
title_full_unstemmed Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors
title_short Studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors
title_sort studies of translational misreading in vivo show that the ribosome very efficiently discriminates against most potential errors
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3866648/
https://www.ncbi.nlm.nih.gov/pubmed/24249223
http://dx.doi.org/10.1261/rna.039792.113
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