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ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression
Adenosine deaminases acting on RNA (ADARs) convert adenosine to inosine, which is then recognized as guanosine. To study the role of ADAR proteins in RNA editing and gene regulation, we sequenced and compared the DNA and RNA of human B cells. Then, we followed up the findings experimentally with siR...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3935819/ https://www.ncbi.nlm.nih.gov/pubmed/24183664 http://dx.doi.org/10.1016/j.celrep.2013.10.002 |
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author | Wang, Isabel X. So, Elizabeth Devlin, James L. Zhao, Yue Wu, Ming Cheung, Vivian G. |
author_facet | Wang, Isabel X. So, Elizabeth Devlin, James L. Zhao, Yue Wu, Ming Cheung, Vivian G. |
author_sort | Wang, Isabel X. |
collection | PubMed |
description | Adenosine deaminases acting on RNA (ADARs) convert adenosine to inosine, which is then recognized as guanosine. To study the role of ADAR proteins in RNA editing and gene regulation, we sequenced and compared the DNA and RNA of human B cells. Then, we followed up the findings experimentally with siRNA knockdown and RNA and protein immunoprecipitations. The results uncovered over 60,000 A-to-G editing sites and several thousand genes whose expression levels are influenced by ADARs. Of these ADAR targets, 90% were identified. Our results also reveal that ADAR regulates transcript stability and gene expression through interaction with HuR (ELAVL1). These findings extend the role of ADAR and show that it cooperates with other RNA-processing proteins to regulate the sequence and expression of transcripts in human cells. |
format | Online Article Text |
id | pubmed-3935819 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
record_format | MEDLINE/PubMed |
spelling | pubmed-39358192014-11-14 ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression Wang, Isabel X. So, Elizabeth Devlin, James L. Zhao, Yue Wu, Ming Cheung, Vivian G. Cell Rep Article Adenosine deaminases acting on RNA (ADARs) convert adenosine to inosine, which is then recognized as guanosine. To study the role of ADAR proteins in RNA editing and gene regulation, we sequenced and compared the DNA and RNA of human B cells. Then, we followed up the findings experimentally with siRNA knockdown and RNA and protein immunoprecipitations. The results uncovered over 60,000 A-to-G editing sites and several thousand genes whose expression levels are influenced by ADARs. Of these ADAR targets, 90% were identified. Our results also reveal that ADAR regulates transcript stability and gene expression through interaction with HuR (ELAVL1). These findings extend the role of ADAR and show that it cooperates with other RNA-processing proteins to regulate the sequence and expression of transcripts in human cells. 2013-10-31 2013-11-14 /pmc/articles/PMC3935819/ /pubmed/24183664 http://dx.doi.org/10.1016/j.celrep.2013.10.002 Text en © 2013 The Authors http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-No Derivative Works License, which permits non-commercial use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Article Wang, Isabel X. So, Elizabeth Devlin, James L. Zhao, Yue Wu, Ming Cheung, Vivian G. ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression |
title | ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression |
title_full | ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression |
title_fullStr | ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression |
title_full_unstemmed | ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression |
title_short | ADAR Regulates RNA Editing, Transcript Stability, and Gene Expression |
title_sort | adar regulates rna editing, transcript stability, and gene expression |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3935819/ https://www.ncbi.nlm.nih.gov/pubmed/24183664 http://dx.doi.org/10.1016/j.celrep.2013.10.002 |
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