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Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody
The engineering of catalytic function in antibodies requires precise information on their structure. Here, results are presented that show how the antibody domain structure affects its functionality. The previously designed organophosphate-metabolizing reactibody A17 has been re-engineered by repla...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3949517/ https://www.ncbi.nlm.nih.gov/pubmed/24598740 http://dx.doi.org/10.1107/S1399004713032446 |
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author | Ponomarenko, Natalia Chatziefthimiou, Spyros D. Kurkova, Inna Mokrushina, Yuliana Mokrushina, Yuliana Stepanova, Anastasiya Smirnov, Ivan Avakyan, Marat Bobik, Tatyana Mamedov, Azad Mitkevich, Vladimir Belogurov, Alexey Fedorova, Olga S. Dubina, Michael Golovin, Andrey Lamzin, Victor Friboulet, Alain Makarov, Alexander A. Wilmanns, Matthias Gabibov, Alexander |
author_facet | Ponomarenko, Natalia Chatziefthimiou, Spyros D. Kurkova, Inna Mokrushina, Yuliana Mokrushina, Yuliana Stepanova, Anastasiya Smirnov, Ivan Avakyan, Marat Bobik, Tatyana Mamedov, Azad Mitkevich, Vladimir Belogurov, Alexey Fedorova, Olga S. Dubina, Michael Golovin, Andrey Lamzin, Victor Friboulet, Alain Makarov, Alexander A. Wilmanns, Matthias Gabibov, Alexander |
author_sort | Ponomarenko, Natalia |
collection | PubMed |
description | The engineering of catalytic function in antibodies requires precise information on their structure. Here, results are presented that show how the antibody domain structure affects its functionality. The previously designed organophosphate-metabolizing reactibody A17 has been re-engineered by replacing its constant κ light chain by the λ chain (A17λ), and the X-ray structure of A17λ has been determined at 1.95 Å resolution. It was found that compared with A17κ the active centre of A17λ is displaced, stabilized and made more rigid owing to interdomain interactions involving the CDR loops from the V(L) and V(H) domains. These V(L)/V(H) domains also have lower mobility, as deduced from the atomic displacement parameters of the crystal structure. The antibody elbow angle is decreased to 126° compared with 138° in A17κ. These structural differences account for the subtle changes in catalytic efficiency and thermodynamic parameters determined with two organophosphate ligands, as well as in the affinity for peptide substrates selected from a combinatorial cyclic peptide library, between the A17κ and A17λ variants. The data presented will be of interest and relevance to researchers dealing with the design of antibodies with tailor-made functions. |
format | Online Article Text |
id | pubmed-3949517 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-39495172014-03-12 Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody Ponomarenko, Natalia Chatziefthimiou, Spyros D. Kurkova, Inna Mokrushina, Yuliana Mokrushina, Yuliana Stepanova, Anastasiya Smirnov, Ivan Avakyan, Marat Bobik, Tatyana Mamedov, Azad Mitkevich, Vladimir Belogurov, Alexey Fedorova, Olga S. Dubina, Michael Golovin, Andrey Lamzin, Victor Friboulet, Alain Makarov, Alexander A. Wilmanns, Matthias Gabibov, Alexander Acta Crystallogr D Biol Crystallogr Research Papers The engineering of catalytic function in antibodies requires precise information on their structure. Here, results are presented that show how the antibody domain structure affects its functionality. The previously designed organophosphate-metabolizing reactibody A17 has been re-engineered by replacing its constant κ light chain by the λ chain (A17λ), and the X-ray structure of A17λ has been determined at 1.95 Å resolution. It was found that compared with A17κ the active centre of A17λ is displaced, stabilized and made more rigid owing to interdomain interactions involving the CDR loops from the V(L) and V(H) domains. These V(L)/V(H) domains also have lower mobility, as deduced from the atomic displacement parameters of the crystal structure. The antibody elbow angle is decreased to 126° compared with 138° in A17κ. These structural differences account for the subtle changes in catalytic efficiency and thermodynamic parameters determined with two organophosphate ligands, as well as in the affinity for peptide substrates selected from a combinatorial cyclic peptide library, between the A17κ and A17λ variants. The data presented will be of interest and relevance to researchers dealing with the design of antibodies with tailor-made functions. International Union of Crystallography 2014-02-15 /pmc/articles/PMC3949517/ /pubmed/24598740 http://dx.doi.org/10.1107/S1399004713032446 Text en © Ponomarenko et al. 2014 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Ponomarenko, Natalia Chatziefthimiou, Spyros D. Kurkova, Inna Mokrushina, Yuliana Mokrushina, Yuliana Stepanova, Anastasiya Smirnov, Ivan Avakyan, Marat Bobik, Tatyana Mamedov, Azad Mitkevich, Vladimir Belogurov, Alexey Fedorova, Olga S. Dubina, Michael Golovin, Andrey Lamzin, Victor Friboulet, Alain Makarov, Alexander A. Wilmanns, Matthias Gabibov, Alexander Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody |
title | Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody |
title_full | Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody |
title_fullStr | Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody |
title_full_unstemmed | Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody |
title_short | Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody |
title_sort | role of κ→λ light-chain constant-domain switch in the structure and functionality of a17 reactibody |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3949517/ https://www.ncbi.nlm.nih.gov/pubmed/24598740 http://dx.doi.org/10.1107/S1399004713032446 |
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