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Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes

Genome-wide association studies (GWAS) have identified reproducible genetic associations with hundreds of human diseases and traits. The vast majority of these associated single nucleotide polymorphisms (SNPs) are non-coding, highlighting the challenge in moving from genetic findings to mechanistic...

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Autores principales: Chami, Nathalie, Lettre, Guillaume
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978511/
https://www.ncbi.nlm.nih.gov/pubmed/24705286
http://dx.doi.org/10.3390/genes5010051
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author Chami, Nathalie
Lettre, Guillaume
author_facet Chami, Nathalie
Lettre, Guillaume
author_sort Chami, Nathalie
collection PubMed
description Genome-wide association studies (GWAS) have identified reproducible genetic associations with hundreds of human diseases and traits. The vast majority of these associated single nucleotide polymorphisms (SNPs) are non-coding, highlighting the challenge in moving from genetic findings to mechanistic and functional insights. Nevertheless, large-scale (epi)genomic studies and bioinformatic analyses strongly suggest that GWAS hits are not randomly distributed in the genome but rather pinpoint specific biological pathways important for disease development or phenotypic variation. In this review, we focus on GWAS discoveries for the three main blood cell types: red blood cells, white blood cells and platelets. We summarize the knowledge gained from GWAS of these phenotypes and discuss their possible clinical implications for common (e.g., anemia) and rare (e.g., myeloproliferative neoplasms) human blood-related diseases. Finally, we argue that blood phenotypes are ideal to study the genetics of complex human traits because they are fully amenable to experimental testing.
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spelling pubmed-39785112014-04-08 Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes Chami, Nathalie Lettre, Guillaume Genes (Basel) Review Genome-wide association studies (GWAS) have identified reproducible genetic associations with hundreds of human diseases and traits. The vast majority of these associated single nucleotide polymorphisms (SNPs) are non-coding, highlighting the challenge in moving from genetic findings to mechanistic and functional insights. Nevertheless, large-scale (epi)genomic studies and bioinformatic analyses strongly suggest that GWAS hits are not randomly distributed in the genome but rather pinpoint specific biological pathways important for disease development or phenotypic variation. In this review, we focus on GWAS discoveries for the three main blood cell types: red blood cells, white blood cells and platelets. We summarize the knowledge gained from GWAS of these phenotypes and discuss their possible clinical implications for common (e.g., anemia) and rare (e.g., myeloproliferative neoplasms) human blood-related diseases. Finally, we argue that blood phenotypes are ideal to study the genetics of complex human traits because they are fully amenable to experimental testing. MDPI 2014-01-28 /pmc/articles/PMC3978511/ /pubmed/24705286 http://dx.doi.org/10.3390/genes5010051 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Review
Chami, Nathalie
Lettre, Guillaume
Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes
title Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes
title_full Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes
title_fullStr Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes
title_full_unstemmed Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes
title_short Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes
title_sort lessons and implications from genome-wide association studies (gwas) findings of blood cell phenotypes
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978511/
https://www.ncbi.nlm.nih.gov/pubmed/24705286
http://dx.doi.org/10.3390/genes5010051
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