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Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes
Genome-wide association studies (GWAS) have identified reproducible genetic associations with hundreds of human diseases and traits. The vast majority of these associated single nucleotide polymorphisms (SNPs) are non-coding, highlighting the challenge in moving from genetic findings to mechanistic...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978511/ https://www.ncbi.nlm.nih.gov/pubmed/24705286 http://dx.doi.org/10.3390/genes5010051 |
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author | Chami, Nathalie Lettre, Guillaume |
author_facet | Chami, Nathalie Lettre, Guillaume |
author_sort | Chami, Nathalie |
collection | PubMed |
description | Genome-wide association studies (GWAS) have identified reproducible genetic associations with hundreds of human diseases and traits. The vast majority of these associated single nucleotide polymorphisms (SNPs) are non-coding, highlighting the challenge in moving from genetic findings to mechanistic and functional insights. Nevertheless, large-scale (epi)genomic studies and bioinformatic analyses strongly suggest that GWAS hits are not randomly distributed in the genome but rather pinpoint specific biological pathways important for disease development or phenotypic variation. In this review, we focus on GWAS discoveries for the three main blood cell types: red blood cells, white blood cells and platelets. We summarize the knowledge gained from GWAS of these phenotypes and discuss their possible clinical implications for common (e.g., anemia) and rare (e.g., myeloproliferative neoplasms) human blood-related diseases. Finally, we argue that blood phenotypes are ideal to study the genetics of complex human traits because they are fully amenable to experimental testing. |
format | Online Article Text |
id | pubmed-3978511 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-39785112014-04-08 Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes Chami, Nathalie Lettre, Guillaume Genes (Basel) Review Genome-wide association studies (GWAS) have identified reproducible genetic associations with hundreds of human diseases and traits. The vast majority of these associated single nucleotide polymorphisms (SNPs) are non-coding, highlighting the challenge in moving from genetic findings to mechanistic and functional insights. Nevertheless, large-scale (epi)genomic studies and bioinformatic analyses strongly suggest that GWAS hits are not randomly distributed in the genome but rather pinpoint specific biological pathways important for disease development or phenotypic variation. In this review, we focus on GWAS discoveries for the three main blood cell types: red blood cells, white blood cells and platelets. We summarize the knowledge gained from GWAS of these phenotypes and discuss their possible clinical implications for common (e.g., anemia) and rare (e.g., myeloproliferative neoplasms) human blood-related diseases. Finally, we argue that blood phenotypes are ideal to study the genetics of complex human traits because they are fully amenable to experimental testing. MDPI 2014-01-28 /pmc/articles/PMC3978511/ /pubmed/24705286 http://dx.doi.org/10.3390/genes5010051 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Review Chami, Nathalie Lettre, Guillaume Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes |
title | Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes |
title_full | Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes |
title_fullStr | Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes |
title_full_unstemmed | Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes |
title_short | Lessons and Implications from Genome-Wide Association Studies (GWAS) Findings of Blood Cell Phenotypes |
title_sort | lessons and implications from genome-wide association studies (gwas) findings of blood cell phenotypes |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978511/ https://www.ncbi.nlm.nih.gov/pubmed/24705286 http://dx.doi.org/10.3390/genes5010051 |
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