RECLU: a pipeline to discover reproducible transcriptional start sites and their alternative regulation using capped analysis of gene expression (CAGE)

BACKGROUND: Next generation sequencing based technologies are being extensively used to study transcriptomes. Among these, cap analysis of gene expression (CAGE) is specialized in detecting the most 5’ ends of RNA molecules. After mapping the sequenced reads back to a reference genome CAGE data high...

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Detalles Bibliográficos
Autores principales: Ohmiya, Hiroko, Vitezic, Morana, Frith, Martin C, Itoh, Masayoshi, Carninci, Piero, Forrest, Alistair RR, Hayashizaki, Yoshihide, Lassmann, Timo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4029093/
https://www.ncbi.nlm.nih.gov/pubmed/24779366
http://dx.doi.org/10.1186/1471-2164-15-269

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4029093/
https://www.ncbi.nlm.nih.gov/pubmed/24779366
http://dx.doi.org/10.1186/1471-2164-15-269

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