CRAC: an integrated approach to the analysis of RNA-seq reads

A large number of RNA-sequencing studies set out to predict mutations, splice junctions or fusion RNAs. We propose a method, CRAC, that integrates genomic locations and local coverage to enable such predictions to be made directly from RNA-seq read analysis. A k-mer profiling approach detects candid...

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Detalles Bibliográficos
Autores principales: Philippe, Nicolas, Salson, Mikaël, Commes, Thérèse, Rivals, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4053775/
https://www.ncbi.nlm.nih.gov/pubmed/23537109
http://dx.doi.org/10.1186/gb-2013-14-3-r30

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4053775/
https://www.ncbi.nlm.nih.gov/pubmed/23537109
http://dx.doi.org/10.1186/gb-2013-14-3-r30

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