A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection

Numerous high-throughput sequencing studies have focused on detecting conventionally spliced mRNAs in RNA-seq data. However, non-standard RNAs arising through gene fusion, circularization or trans-splicing are often neglected. We introduce a novel, unbiased algorithm to detect splice junctions from...

Descripción completa

Detalles Bibliográficos
Autores principales: Hoffmann, Steve, Otto, Christian, Doose, Gero, Tanzer, Andrea, Langenberger, David, Christ, Sabina, Kunz, Manfred, Holdt, Lesca M, Teupser, Daniel, Hackermüller, Jörg, Stadler, Peter F
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056463/
https://www.ncbi.nlm.nih.gov/pubmed/24512684
http://dx.doi.org/10.1186/gb-2014-15-2-r34

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056463/
https://www.ncbi.nlm.nih.gov/pubmed/24512684
http://dx.doi.org/10.1186/gb-2014-15-2-r34

Ejemplares similares