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biobambam: tools for read pair collation based algorithms on BAM files

BACKGROUND: Sequence alignment data is often ordered by coordinate (id of the reference sequence plus position on the sequence where the fragment was mapped) when stored in BAM files, as this simplifies the extraction of variants between the mapped data and the reference or of variants within the ma...

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Detalles Bibliográficos
Autores principales: Tischler, German, Leonard, Steven
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4075596/
http://dx.doi.org/10.1186/1751-0473-9-13